Changes for page Molecular Tools: computation of dissociation rates
Last modified by giuliadarrigo on 2023/06/26 14:11
From version 30.1
edited by dariak
on 2022/03/22 18:07
on 2022/03/22 18:07
Change comment:
Migrated property [owner] from class [Collaboratory.Apps.Collab.Code.CollabClass]
To version 35.1
edited by giuliadarrigo
on 2023/06/14 09:06
on 2023/06/14 09:06
Change comment:
There is no comment for this version
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... ... @@ -2,11 +2,13 @@ 2 2 ((( 3 3 (% class="container" %) 4 4 ((( 5 - *(((5 +((( 6 6 = Molecular Tools: computation of unbinding rates = 7 7 ))) 8 8 9 -Authors: D. Kokh 9 +This collab contains a set of tools and tutorials for analysing and computing unbinding rates of protein-small molecule and protein-protein complexes. 10 + 11 +Authors: D. Kokh, G. D'Arrigo, R. Wade 10 10 ))) 11 11 ))) 12 12 ... ... @@ -16,7 +16,7 @@ 16 16 ((( 17 17 = What can I find here? = 18 18 19 -Jupyter Lab workflows that help sto setup, carry out,and analyze dissociation of protein-drug and protein-protein complexes21 +Jupyter Lab workflows that help to set up, carry out and analyze dissociation of protein-drug and protein-protein complexes. 20 20 21 21 22 22 (% style="text-align:center" %) ... ... @@ -32,15 +32,18 @@ 32 32 33 33 (% class="box" %) 34 34 ((( 35 -**Computation of Protein- Protein Unbinding rates**:Jupyter Notebooks/PP-kinetics.ipynb37 +**Computation of Protein-Ligand Unbinding rates**: 36 36 37 -[[https:~~/~~/lab.ebrains.eu/user/daria k/lab/tree/drive/Shared%20with%20all/Molecular%20Tools:%20computation%20of%20%20unbinding%20rates%20>>https://lab.ebrains.eu/user/dariak/lab/tree/drive/Shared%20with%20groups/Molecular%20Tools:%20computation%20of%20%20unbinding%20rates%20]]39 +[[https:~~/~~/lab.ch.ebrains.eu/hub/user-redirect/lab/tree/drive/Shared%20with%20groups/Molecular%20Tools%3A%20computation%20of%20%20unbinding%20rates%20/Training_1011>>url:https://lab.ch.ebrains.eu/hub/user-redirect/lab/tree/drive/Shared%20with%20groups/Molecular%20Tools%3A%20computation%20of%20%20unbinding%20rates%20/Training_1011]]/[[Jupyter_Notebooks>>https://lab.ch.ebrains.eu/user/giuliadarrigo/lab/workspaces/auto-e/tree/drive/Shared%20with%20groups/Molecular%20Tools%3A%20computation%20of%20%20unbinding%20rates%20/Training_1011/Jupyter_Notebooks]] 38 38 39 39 40 -**Computation of Protein-Ligand Unbinding rates**: under development 42 +**Computation of Protein-Protein Unbinding rates**: Jupyter Notebooks/PP-kinetics.ipynb 43 + 44 +[[https:~~/~~/lab.ebrains.eu/user/dariak/lab/tree/drive/Shared%20with%20all/Molecular%20Tools:%20computation%20of%20%20unbinding%20rates%20>>https://lab.ebrains.eu/user/dariak/lab/tree/drive/Shared%20with%20groups/Molecular%20Tools:%20computation%20of%20%20unbinding%20rates%20]] 41 41 ))) 42 42 43 43 48 + 44 44 45 45 ))) 46 46
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