Last modified by adavison on 2022/05/23 22:24
From version 10.1
edited by adavison
on 2020/08/05 11:42
Change comment: Uploaded new attachment "Workflow provenance in the EBRAINS KG.png", version {1}
To version 11.1
edited by adavison
on 2020/08/05 12:20
Change comment: There is no comment for this version

Summary

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19 19  
20 20  We present here the current schemas for representing (a) data analysis and (b) simulations in the Knowledge Graph. These schemas will need to be extended to cover neurorobotics simulations, and probably a more explicit representation of pipelines/workflows (the chaining together of multiple analysis / simulation stages) will be needed.
21 21  
22 +[[image:Workflow provenance in the EBRAINS KG.svg||alt="KG schema for data analysis"]][[image:Workflow provenance in the EBRAINS KG-2.png||alt="KG schema for data analysis"]]
23 +
24 +[[image:Workflow provenance in the EBRAINS KG.png||alt="KG schema for simulation"]]
25 +
26 +(note that the diagrams do not show Agents; the person who launched each analysis/simulation activity is linked to the activity with a ##wasAssociatedWith## connection).
27 +
28 +(% class="box warningmessage" %)
29 +(((
30 +TODO: insert or link to the detailed schemas for each type
31 +)))
32 +
22 22  == Tools for automated capture of provenance ==
23 23  
35 +(% class="wikigeneratedid" %)
36 +
37 +Issues to discuss:
38 +
24 24  * on different systems:
25 25  ** HPC systems
26 26  ** neuromorphic systems
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31 31  
32 32  == Communication between computer systems and the KG ==
33 33  
34 -* local cache and synchronization?
49 +Two issues arise:
35 35  
51 +(i) fine-grained provenance information may need to be obtained on compute nodes, which may not have network access;
52 +
53 +(ii) failures of provenance upload should not cause the workflows to fail;
54 +
55 +An overall solution for both of these issues would perhaps involve a local cache and later synchronization.
56 +
36 36  == User interfaces for browsing, visualizing, and searching provenance information ==
37 37  
38 -
59 +(% class="box infomessage" %)
60 +(((
61 +DISCUSSION NEEDED: integrate visualization of prov information into KG Search UI, and/or develop separate app?
62 +)))