Changes for page Provenance of simulation and data analysis workflows
Last modified by adavison on 2022/05/23 22:24
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... ... @@ -8,28 +8,17 @@ 8 8 * management and tracking of workflows/projects by the scientists/engineers involved 9 9 * evaluation/review by other scientists and engineers 10 10 11 + 11 11 12 12 == Standards == 13 13 14 -The [[W3C PROV standard>>https://www.w3.org/TR/2013/NOTE-prov-overview-20130430/||rel="noopener noreferrer" target="_blank"]] provides a data model and related tools for provenance interchange on the web. The following diagram shows the three base classes of the PROV data model: Entity, Activity, and Agent. These three classes form the basis for the representation of provenance in the EBRAINS Knowledge Graph: every node in the KG has a type which is a subclass of one of these base classes. 15 +The [[W3C PROV standard>>https://www.w3.org/TR/2013/NOTE-prov-overview-20130430/||rel=" noopener noreferrer" target="_blank"]] provides a data model and related tools for provenance interchange on the web. The following diagram shows the three base classes of the PROV data model: Entity, Activity, and Agent. These three classes form the basis for the representation of provenance in the EBRAINS Knowledge Graph: every node in the KG has a type which is a subclass of one of these base classes. 15 15 16 16 [[image:starting-points.svg||alt="The three Starting Point classes of the W3C PROV ontology and the properties that relate them."]] 17 17 18 18 == Storage of provenance in the Knowledge Graph == 19 19 20 -We present here the current schemas for representing (a) data analysis and (b) simulations in the Knowledge Graph. These schemas will need to be extended to cover neurorobotics simulations, and probably a more explicit representation of pipelines/workflows (the chaining together of multiple analysis / simulation stages) will be needed. 21 21 22 -[[image:Workflow provenance in the EBRAINS KG.svg||alt="KG schema for data analysis"]][[image:Workflow provenance in the EBRAINS KG-2.png||alt="KG schema for data analysis"]] 23 - 24 -[[image:Workflow provenance in the EBRAINS KG.png||alt="KG schema for simulation"]] 25 - 26 -(note that the diagrams do not show Agents; the person who launched each analysis/simulation activity is linked to the activity with a ##wasAssociatedWith## connection). 27 - 28 -(% class="box warningmessage" %) 29 -((( 30 -TODO: insert or link to the detailed schemas for each type 31 -))) 32 - 33 33 == Tools for automated capture of provenance == 34 34 35 35 * on different systems: ... ... @@ -44,6 +44,7 @@ 44 44 45 45 * local cache and synchronization? 46 46 36 + 47 47 == User interfaces for browsing, visualizing, and searching provenance information == 48 48 49 49
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