Changes for page 03. Building and simulating a simple model
Last modified by adavison on 2022/10/04 13:55
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... ... @@ -38,30 +38,13 @@ 38 38 (% class="wikigeneratedid" id="HStateprerequisites" %) 39 39 (% class="small" %)**State prerequisites** 40 40 41 - To follow this tutorial, you need a basic knowledge of neuroscience (high-school level or greater), basic familiarity with the Python programming language, and you should have already followed our earlier tutorial video which guides you through the installation process.41 +. 42 42 43 -This video covers PyNN 0.10. If you've installed a more recent version of PyNN, you might want to look for an updated version of this video. 44 - 45 45 (% class="wikigeneratedid" id="HDescription2Cexplanation2Candpractice" %) 46 46 (% class="small" %)**Description, explanation, and practice** 47 47 48 - PyNN is a tool for building models of nervous systems, and parts of nervous systems, at the level of individual neurons and synapses.46 +. 49 49 50 -We'll start off creating a group of 100 neurons, using a really simple model of a neuron, the leaky integrate-and-fire model. 51 - 52 -When we inject positive current into this model, either from an electrode or from an excitatory synapse, it increases the voltage across the cell membrane, until the voltage reaches a certain threshold. 53 - 54 -At that point, the neuron produces an action potential, also called a spike, and the membrane voltage is reset. 55 - 56 -Let's start by writing a docstring, "Simple network model using PyNN". 57 - 58 -For now, we're going to use the NEST simulator to simulate this model, so we import the PyNN-for-NEST module. 59 - 60 -Like with any numerical model, we need to break time down into small steps, so let's set that up with steps of 0.1 milliseconds. 61 - 62 -PyNN comes with a selection of integrate-and-fire models. We're going to use the IF_curr_exp model, where "IF" is for integrate-and-fire, "curr" means that synaptic responses are changes in current, and "exp" means that the shape of the current is a decaying exponential function. 63 - 64 - 65 65 (% class="wikigeneratedid" id="HSummary28Inthistutorial2CyouhavelearnedtodoX202629" %) 66 66 (% class="small" %)**Summary (In this tutorial, you have learned to do X…)** 67 67