Changes for page 02. Installing PyNN - Linux
Last modified by adavison on 2022/10/04 13:53
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... ... @@ -105,33 +105,15 @@ 105 105 106 106 Now that we have our project's virtual environment setup, we are now ready to install PyNN and other simulators. In general, it is advisable to install the various simulators (especially NEURON and NEST) prior to installing PyNN, because PyNN will then auto compile NEURON's NMODL fles and NEST's extensions during installation. Alternatively, this would need to be done manually as described on the PyNN website. In this tutorial, we will adopt the easier approach and begin by installing the simulators. For the purposes of this tutorial, we shall demonstrate the installation of Brian2, NEURON and NEST simulators. 107 107 108 -We start here with the installation of Brian2. Brian2 can be installed simply using the pip command.108 +We start here with the installation of Brian2. 109 109 110 110 (% class="box infomessage" %) 111 111 ((( 112 112 **Screencast** - terminal 113 - \\(%style="color:#000000" %)pip install brian2113 + 114 114 ))) 115 115 116 -This will install Brian2, along with all its dependencies such as 'cython', 'numpy', etc. We can now go back into our virtual environment's 'site-packages' directory to see how it is now populated with all these packages. 117 117 118 -To confirm that we have properly installed Brian2 on our computer, we can test as follows: 119 - 120 -(% class="box infomessage" %) 121 -((( 122 -**Screencast** - terminal 123 -\\(% style="color:#000000" %)python 124 -\\import brian2 125 -))) 126 - 127 -If 128 - 129 -(% class="box infomessage" %) 130 -((( 131 -**Screencast** - file explorer 132 -\\(% style="color:#000000" %)<< show directory contents lib/python3.9/site-packages >> 133 -))) 134 - 135 135 (% class="box successmessage" %) 136 136 ((( 137 137 **Slide** recap of learning objectives