Changes for page 3. Tutorials and manuals

Last modified by puchades on 2021/12/07 11:18
From version 16.1
edited by puchades
on 2020/09/21 16:15
Change comment: There is no comment for this version
To version 24.1
edited by puchades
on 2020/10/06 11:09
Change comment: There is no comment for this version

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1 -== (% style="color:#c0392b" %)Video tutorial(%%) ==
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3 3  == ==
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5 5  == (% style="color:#c0392b" %)Preparation of the image series(%%) ==
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18 18  
19 19  The latest VisuAlign manual can be found here: [[(% style="color:#27ae60" %)VisuAlign_user_guide>>https://www.nitrc.org/docman/index.php?group_id=1426&selected_doc_group_id=5980&language_id=1#folder]]
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26 +(% id="HQuickSTEPS:" %)
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21 21  == (% style="color:#c0392b" %)QuickSTEPS:(%%) ==
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23 23  Open the //QuickNII// program from the .exe file. Once the program opens, click the **Manage data button** and load your XML file (or JSON file if you have one from before)
24 24  
25 -=== **Anchoring procedure** ===
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27 27  The alignment procedure consists of two main tasks:
28 28  
29 29  1. Determine the dorsoventral and mediolateral cutting angle of the section series, apply same angles for all slices.
30 -1. Adjust the atlas slices generated along these angles to match individual sections.
40 +1. Adjust the atlas slices generated along these angles to match individual section
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31 31  
32 32  === A) To determine the cutting angles: ===
33 33  
QuickNII_EBRAINS.mp4
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1 +XWiki.puchades
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