Changes for page 3. Tutorials and manuals

Last modified by puchades on 2021/12/07 11:18

From version 18.1
edited by puchades
on 2020/09/21 16:20
Change comment: There is no comment for this version
To version 16.1
edited by puchades
on 2020/09/21 16:15
Change comment: There is no comment for this version

Summary

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18 18  
19 19  The latest VisuAlign manual can be found here: [[(% style="color:#27ae60" %)VisuAlign_user_guide>>https://www.nitrc.org/docman/index.php?group_id=1426&selected_doc_group_id=5980&language_id=1#folder]]
20 20  
21 -(% class="box infomessage" id="HQuickSTEPS:" %)
22 -(((
23 -(% class="lead" %)
24 -(% style="color:#c0392b" %)QuickSTEPS:
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21 +== (% style="color:#c0392b" %)QuickSTEPS:(%%) ==
26 26  
27 27  Open the //QuickNII// program from the .exe file. Once the program opens, click the **Manage data button** and load your XML file (or JSON file if you have one from before)
28 28  
29 -(% class="box infomessage" %)
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31 -(% class="box infomessage" %)
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25 +=== **Anchoring procedure** ===
26 +
33 33  The alignment procedure consists of two main tasks:
34 34  
35 35  1. Determine the dorsoventral and mediolateral cutting angle of the section series, apply same angles for all slices.
36 -1. Adjust the atlas slices generated along these angles to match individual section
37 -)))
38 -)))
30 +1. Adjust the atlas slices generated along these angles to match individual sections.
39 39  
40 40  === A) To determine the cutting angles: ===
41 41