Changes for page 3. Tutorials and manuals

Last modified by puchades on 2021/12/07 11:18
From version 19.1
edited by puchades
on 2020/09/21 16:23
Change comment: There is no comment for this version
To version 16.1
edited by puchades
on 2020/09/21 16:15
Change comment: There is no comment for this version

Summary

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1 1  == (% style="color:#c0392b" %)Video tutorial(%%) ==
2 2  
3 -== ==
3 +== ==
4 4  
5 5  == (% style="color:#c0392b" %)Preparation of the image series(%%) ==
6 6  
... ... @@ -18,23 +18,16 @@
18 18  
19 19  The latest VisuAlign manual can be found here: [[(% style="color:#27ae60" %)VisuAlign_user_guide>>https://www.nitrc.org/docman/index.php?group_id=1426&selected_doc_group_id=5980&language_id=1#folder]]
20 20  
21 -(% id="HQuickSTEPS:" %)
22 -(((
23 23  == (% style="color:#c0392b" %)QuickSTEPS:(%%) ==
24 -)))
25 25  
26 26  Open the //QuickNII// program from the .exe file. Once the program opens, click the **Manage data button** and load your XML file (or JSON file if you have one from before)
27 27  
28 -(% class="box infomessage" %)
29 -(((
30 -(% class="box infomessage" %)
31 -(((
25 +=== **Anchoring procedure** ===
26 +
32 32  The alignment procedure consists of two main tasks:
33 33  
34 34  1. Determine the dorsoventral and mediolateral cutting angle of the section series, apply same angles for all slices.
35 -1. Adjust the atlas slices generated along these angles to match individual section
36 -)))
37 -)))
30 +1. Adjust the atlas slices generated along these angles to match individual sections.
38 38  
39 39  === A) To determine the cutting angles: ===
40 40