Changes for page 3. Tutorials and manuals

Last modified by puchades on 2021/12/07 11:18
From version 23.1
edited by puchades
on 2020/10/05 10:00
Change comment: There is no comment for this version
To version 16.1
edited by puchades
on 2020/09/21 16:15
Change comment: There is no comment for this version

Summary

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1 1  == (% style="color:#c0392b" %)Video tutorial(%%) ==
2 2  
3 -
4 -(% style="color:#c0392b" %)[[image:QuickNII_EBRAINS.mp4||height="211" width="211"]]
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8 -
9 9  == ==
10 10  
11 11  == (% style="color:#c0392b" %)Preparation of the image series(%%) ==
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24 24  
25 25  The latest VisuAlign manual can be found here: [[(% style="color:#27ae60" %)VisuAlign_user_guide>>https://www.nitrc.org/docman/index.php?group_id=1426&selected_doc_group_id=5980&language_id=1#folder]]
26 26  
27 -(% id="HQuickSTEPS:" %)
28 -(((
29 29  == (% style="color:#c0392b" %)QuickSTEPS:(%%) ==
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31 31  
32 32  Open the //QuickNII// program from the .exe file. Once the program opens, click the **Manage data button** and load your XML file (or JSON file if you have one from before)
33 33  
34 -(% class="box infomessage" %)
35 -(((
36 -(% class="box infomessage" %)
37 -(((
25 +=== **Anchoring procedure** ===
26 +
38 38  The alignment procedure consists of two main tasks:
39 39  
40 40  1. Determine the dorsoventral and mediolateral cutting angle of the section series, apply same angles for all slices.
41 -1. Adjust the atlas slices generated along these angles to match individual section
42 -)))
43 -)))
30 +1. Adjust the atlas slices generated along these angles to match individual sections.
44 44  
45 45  === A) To determine the cutting angles: ===
46 46  
QuickNII_EBRAINS.mp4
Author
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1 -XWiki.puchades
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1 -26.3 MB
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