Changes for page QUINT demo collab

Last modified by puchades on 2023/10/18 15:44
From version 49.1
edited by sharoncy
on 2022/02/08 15:53
Change comment: There is no comment for this version
To version 47.1
edited by sharoncy
on 2022/02/08 15:52
Change comment: There is no comment for this version

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26 26  1. **[[NutilWeb:>>https://wiki.ebrains.eu/bin/view/Collabs/quint-demo/NutilWeb]] **enables quantification of the extracted objects per atlas-region.
27 27  1. [[**Meshview: **>>https://wiki.ebrains.eu/bin/view/Collabs/quint-demo/Meshview]]enables visualisation in 3D reference space.
28 28  
29 +The apps may be used separately, or in sequence for full QUINT analysis. The Image Service is used to convert the images to formats that are compatible with WebAlign and webilastik. The output of WebAlign and Webilastik are fed into NutilWeb, which generates reports, plots, overlay images and coordinate files that can be downloaded from the Collab Bucket. The coordinates files may be viewed in Meshview. File transfer between the apps is done through the Bucket.
29 29  
30 -The apps may be used separately, or in sequence for full QUINT analysis.
31 -
32 -The Image Service is used to convert the images to formats that are compatible with WebAlign and webilastik. The output of WebAlign and Webilastik are fed into NutilWeb, which generates reports, plots, overlay images and coordinate files that can be downloaded from the Collab Bucket. The coordinates files may be viewed in Meshview. File transfer between the apps is done through the Bucket.
33 -
34 34  == Demo dataset ==
35 35  
36 36  A demo dataset for use with the apps is provided in the Bucket. The demo material originates from histological section images from the transgenic Arctic / Swedish mouse model of Alzheimer's disease.