Wiki source code of QUINT demo
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| 5 | = QUINT demo = | ||
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| 7 | This collab has the relevant Collaboratory Apps installed for QUINT demo for reporting purposes. | ||
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| 15 | == **What is QUINT?** == | ||
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| 17 | QUINT is a workflow that uses several Collaboratory Apps for atlas-based quantification of objects such as cells in 2D histological image series from mouse or rat brain. | ||
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| 19 | * **WebAlign: **enables registration of the image series to a reference atlas. | ||
| 20 | * **Ilastik:** enables extraction of objects such as cells. | ||
| 21 | * **Nutil: **enables quantification per atlas-region. | ||
| 22 | * **Meshview: **enables visualisation of the Nutil coordinate output. | ||
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| 24 | = Who has access? = | ||
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| 26 | * Collaboratory app developers | ||
| 27 | * Reviewers | ||
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| 35 | {{box title="**Contents**"}} | ||
| 36 | {{toc/}} | ||
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