Changes for page 2. Image pre-processing with Nutil Transform
Last modified by puchades on 2021/12/07 10:37
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... ... @@ -13,14 +13,15 @@ 13 13 14 14 === Naming convention: === 15 15 16 -The file names of the segmentation andatlasmapsthat correspond to a particular section must contain a unique ID in the format: sXXX.., with XXX.. representing the section number. The section number should reflect the serial order and spacing of the sections (e.g. s002, s006, s010 for every 4^^th^^ section starting with section 2).16 +For running the QUINT analysis the segmentation files and the customized atlas maps need to match and therefore the segmentation files should follow the same naming format.The file name that correspond to a particular section must contain a unique ID in the format: sXXX.., with XXX.. representing the section number. The section number should reflect the serial order and spacing of the sections (e.g. s002, s006, s010 for every 4^^th^^ section starting with section 2). 17 17 18 18 Example: tg2345_MMSH_s001_segmentation.png 19 19 20 20 (It is fine to include a string of letters and numbers followed by the unique ID). 21 21 22 -For running the QUINT analysis the segmentation files and the customized atlas maps need to match and therefore the segmentation files should follow the same naming format. 23 23 24 24 === Running the transformation === 25 25 25 +Consult the Nutil user manual for detailed procedure (link to Manual on Nitrc.org) 26 + 26 26 [[image:Figure_2_v3.jpg]]