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Last modified by annedevismes on 2021/06/08 11:56
From version 8.1
edited by sharoncy
on 2020/03/28 15:00
Change comment: There is no comment for this version
To version 9.2
edited by puchades
on 2020/04/07 16:41
Change comment: There is no comment for this version

Summary

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Author
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1 -XWiki.sharoncy
1 +XWiki.puchades
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1 1  == [[image:ilastik_logo.PNG||style="float:right"]] ==
2 2  
3 -== (% style="color:#c0392b" %)ilastik(%%) ==
3 +== (% style="color:#c0392b" %)Analysis approach for series of rodent brain section image(%%) ==
4 4  
5 5  Ilastik is a versatile image analysis tool specifically designed for the classification, segmentation and analysis of biological images based on supervised machine learning algorithms.
6 6  
7 -== (% style="color:#c0392b" %)Analysis approach for series of rodent brain section image(%%) ==
8 -
9 9  There are two main approaches for the analysis of rodent brain section images.
10 10  
11 11  1. Pixel classification only (with two or more classes)
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25 25  
26 26  -Apply the classifier to the rest of the images (batch processing)
27 27  
28 --Export the probability maps in HDH5 format, and simple_segmentation images in PNG format with the default settings.
26 +-Export the probability maps in HDF5 format, and simple_segmentation images in PNG format with the default settings.
29 29  
30 30  -Review the results.
31 31