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  • Quantifier.PNG

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3	3	A detailed Nutil user manual is included when downloading the software.
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5		-[[image:Quantifier.PNG]]
6		-
7	7	**Basic steps:**
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9	9	**//Quantifier//** locates and quantifies labelling identified by segmentation in rodent brain section images (mouse or rat). It requires the following input:
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11	11	(% start="1" style="list-style-type:decimal" %)
12		-1. **Segmentations with the labeling displayed in one RGB colour**
	10	+1. **Segmentations with the labelling displayed in one RGB colour**
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14	14	**Requirement:**
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27	27	(% start="3" %)
28	28	1. **Anchored XML** file generated with the //QuickNII// software.
29		-1. **Reference atlas label file** (in LABEL format) corresponding to the relevant atlas. The following reference atlases are included in the //Nutil// package (in the “Labels” folder).
	27	+1. **Reference atlas label file** (in LABEL format) corresponding to the relevant atlas. The following reference atlases are included in the //Nutil// package (in the “Labels” folder).
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31		-[[image:Illustration seg_flat_files.png||height="254" width="500"]]
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34	34
	34	+(% class="wikigeneratedid" id="HH4Won27tAppearinToC" %)
	35	+

Illustration seg_flat_files.png

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Quantifier.PNG

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