Changes for page 5. Quantification and spatial analysis with Nutil
Last modified by puchades on 2021/11/16 09:11
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... ... @@ -15,7 +15,7 @@ 15 15 16 16 * must be 24-bit RGB images in PNG format 17 17 * same proportions as the images used in QuickNII to generate the atlas maps (can be a different size) 18 -* //Quantifier ****//is only able to extract one RGB colour at a time. Apply one RBG colour to all of the objects of interest, and specify this colour code in the //Excel template//.18 +* **//Quantifier //**is only able to extract one RGB colour at a time. Apply one RBG colour to all of the objects of interest, and specify this colour code in the //Excel template//. 19 19 20 20 To generate the segmentations we recommend the //Pixel and// //Object Classification workflows// in the //ilastik// software (//ilastik.org//). However, any image analysis software may be used. 21 21 ... ... @@ -31,4 +31,4 @@ 31 31 [[image:Illustration seg_flat_files.png||height="254" width="500"]] 32 32 33 33 34 - 34 +