Changes for page 6. Output of the QUINT workflow
Last modified by puchades on 2022/02/18 13:42
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... ... @@ -7,16 +7,15 @@ 7 7 8 8 [[image:0209_71661877_resize_Simple Segmentation.png]] 9 9 10 -(% class="small" %)Customized atlas map with individual features representation 11 - 12 - 13 13 (% start="2" %) 14 14 1. (% style="color:#c0392b" %)**Reports in CSV format** 15 15 16 -* RefAtlasRegions: report with output organised based on all the regions in the reference atlas. 17 -* CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section. 18 -* Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section. 13 +-RefAtlasRegions: report with output organised based on all the regions in the reference atlas. 19 19 15 +-CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section. 16 + 17 +-Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section. 18 + 20 20 [[image:Report_example.PNG]] 21 21 22 22 (% start="3" %) ... ... @@ -24,8 +24,6 @@ 24 24 25 25 == (% style="color:#c0392b" %)Visualise the QUINT output(%%) == 26 26 26 +The JSON files contains point clouds coordinates in the selected reference atlas space that can be visualised with the MeshView atlas viewer, available at [[www.nitrc.org/projects/meshview>>url:https://www.nitrc.org/projects/meshview]] via the the corresponding atlas link in MediaWiki link. 27 27 28 28 [[image:QUINTpoint cloud.png]] 29 - 30 - 31 -The JSON files contains point clouds coordinates in the selected reference atlas space that can be visualised with the MeshView atlas viewer, [[available here>>https://www.nitrc.org/projects/meshview]] via the corresponding atlas link in MediaWiki link.