Last modified by puchades on 2022/02/18 13:42

From version 8.1
edited by puchades
on 2020/03/26 09:56
Change comment: There is no comment for this version
To version 10.1
edited by evanhancock
on 2020/07/21 07:36
Change comment: There is no comment for this version

Summary

Details

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Author
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1 -XWiki.puchades
1 +XWiki.evanhancock
Content
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10 10  (% start="2" %)
11 11  1. (% style="color:#c0392b" %)**Reports in CSV format**
12 12  
13 --RefAtlasRegions: report with output organised based on all the regions in the reference atlas.
13 +* RefAtlasRegions: report with output organised based on all the regions in the reference atlas.
14 +* CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section.
15 +* Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section.
14 14  
15 --CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section.
16 -
17 --Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section.
18 -
19 19  [[image:Report_example.PNG]]
20 20  
21 21  (% start="3" %)
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23 23  
24 24  == (% style="color:#c0392b" %)Visualise the QUINT output(%%) ==
25 25  
26 -The JSON files contains the point clouds that can be visualised with the MeshView atlas viewer, which is available at [[www.nitrc.org/projects/meshview>>url:https://www.nitrc.org/projects/meshview]] via the MediaWiki link.
24 +The JSON files contains point clouds coordinates in the selected reference atlas space that can be visualised with the MeshView atlas viewer, [[available here>>https://www.nitrc.org/projects/meshview]] via the the corresponding atlas link in MediaWiki link.
27 27  
28 28  [[image:QUINTpoint cloud.png]]