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8	8	[[image:0209_71661877_resize_Simple Segmentation.png]]
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	10	+(% class="small" %)Customized atlas map with individual features representation
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10	10	(% start="2" %)
11	11	1. (% style="color:#c0392b" %)**Reports in CSV format**
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13		--RefAtlasRegions: report with output organised based on all the regions in the reference atlas.
	16	+* RefAtlasRegions: report with output organised based on all the regions in the reference atlas.
	17	+* CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section.
	18	+* Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section.
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15		--CustomRegionsSummary and CustomRegionSections**: **reports with the output organised based on the custom regions defined in the template for the whole series (Summary) and for each individual section.
16		-
17		--Objects: list of all the objects in the whole series (Whole Brain), with sheets showing breakdown per section.
18		-
19	19	[[image:Report_example.PNG]]
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21	21	(% start="3" %)
22	22	1. (% style="color:#c0392b" %)**Coordinates in JSON format (for the whole series and per section)**
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	25	+* The JSON files contains point clouds coordinates in the selected reference atlas space that can be visualised with the MeshView atlas viewer.
	26	+
24	24	== (% style="color:#c0392b" %)Visualise the QUINT output(%%) ==
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26		-The JSON files contains the point clouds that can be visualised with the MeshView atlas viewer, which is available at [[www.nitrc.org/projects/meshview>>url:https://www.nitrc.org/projects/meshview]] via the MediaWiki link.
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28	28	[[image:QUINTpoint cloud.png]]
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	33	+(% class="small" %)Point clouds visualised with MeshView. Location of human amyloid in blue, mouse amyloid in red and pyroglutamate modified amyloid in green, in Hippocampal regions of transgenic Tg2573 mouse brain. Yates et al. 2019.