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Last modified by puchades on 2022/11/02 10:16

From version 14.1
edited by sharoncy
on 2020/03/09 14:06
Change comment: There is no comment for this version
To version 19.1
edited by sharoncy
on 2020/03/09 14:11
Change comment: There is no comment for this version

Summary

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22 22  In combination, the tools facilitate semi-automated quantification, eliminating the need for more time consuming methods such as stereological analysis with manual delineation of brain regions.
23 23  
24 +Youtube video:[[ https:~~/~~/www.youtube.com/watch?v=yPkAbSfla_c>>https://www.youtube.com/watch?v=yPkAbSfla_c]]
24 24  
26 +
25 25  ==== (% style="color:#c0392b" %)**Workflow highlights**(%%) ====
26 26  
27 -* The QUINT workflow is semi-automated, combining three open-source software that can be operated without scripting knowledge.
28 -* (((
29 -As the quantifications are performed in regions defined by a reference atlas, the region definitions are standardized, allowing comparisons of data from different laboratories.
29 +- The QUINT workflow is semi-automated, combining three open-source software that can be operated without scripting knowledge.
30 +
31 +(((
32 +- As the quantifications are performed in regions defined by a reference atlas, the region definitions are standardized, allowing comparisons of data from different laboratories.
33 +
34 +
35 +==== (% style="color:#c0392b" %)**References**(%%) ====
36 +
37 +Yates SC et al. 2019. QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain. Front. Neuroinform. 13:75. doi: 10.3389/fninf.2019.00075
38 +
39 +[[https>>url:https://www.nitrc.org/projects/nutil/]][[:~~/~~/www.nitrc.org/projects/nutil>>url:https://www.nitrc.org/projects/nutil/]][[/>>url:https://www.nitrc.org/projects/nutil/]]
40 +
41 +[[https:~~/~~/>>url:https://www.nitrc.org/projects/quicknii]][[www.nitrc.org/projects/quicknii>>url:https://www.nitrc.org/projects/quicknii]]
42 +
43 +[[https:~~/~~/www.ilastik.org>>url:https://www.ilastik.org/]][[/>>url:https://www.ilastik.org/]]
30 30  )))
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