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  • Youtube_QUINT.PNG

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	4	+== (% style="color:#c0392b" %)**Workflow Description**(%%) ==
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6	6	The QUINT workflow enables the quantification and spatial analysis of labelled features in histological images of rodent brain sections based on reference atlases of the brain. It utilises three open-source software:
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8	8	1. [[(% style="color:#2980b9" %)//ilastik//>>doc:.3\. Image segmentation with ilastik.WebHome]](%%) allows the extraction of labelled features such as cells by segmentation.
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12	12	In combination, the tools facilitate semi-automated quantification, eliminating the need for more time consuming methods such as stereological analysis with manual delineation of brain regions.
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14		-[[Youtube video>>https://www.youtube.com/watch?v=yPkAbSfla_c]]
	14	+[[[[image:Youtube_QUINT.PNG||height="282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=yPkAbSfla_c]]
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	25	+==== ====
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16	16	==== (% style="color:#c0392b" %)**Workflow highlights**(%%) ====
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18	18	* The QUINT workflow is semi-automated, combining three open-source software that can be operated without scripting knowledge.

Youtube_QUINT.PNG

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	1	+XWiki.puchades

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