Last modified by puchades on 2022/11/02 10:16
From version 39.1
edited by evanhancock
on 2020/07/21 09:41
Change comment: There is no comment for this version
To version 48.1
edited by puchades
on 2020/09/24 09:55
Change comment: There is no comment for this version

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2 -[[image:QUINT_workflow_pic.png||height="394" width="1011"]]
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3 3  
4 4  == (% style="color:#c0392b" %)**Workflow Description**(%%) ==
5 5  
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23 23  
24 24  
25 25  
26 -==== ====
27 27  
28 28  
29 29  
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31 31  
30 +QUINT workflow video
31 +
32 32  ==== (% style="color:#c0392b" %)**Workflow highlights**(%%) ====
33 33  
34 34  * The semi-automated QUINT workflow uses open access software that can be operated without any scripting knowledge.
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39 39  ==== (% style="color:#c0392b" %)**References**(%%) ====
40 40  
41 41  * Yates SC et al. 2019. QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain. Front. Neuroinform. 13:75. doi: [[10.3389/fninf.2019.00075>>https://www.frontiersin.org/articles/10.3389/fninf.2019.00075/full]]
42 -* [[Nutil>>https://www.nitrc.org/projects/nutil/]]
42 +* Groeneboom NE, Yates SC, Puchades MA and Bjaalie JG (2020) Nutil: A Pre- and Post-processing Toolbox for Histological Rodent Brain Section Images. //Front. Neuroinform.// 14:37. doi: 10.3389/fninf.2020.00037
43 +* [[Nutil>>https://github.com/Neural-Systems-at-UIO/nutil]]
43 43  * [[QuickNII>>https://www.nitrc.org/projects/quicknii]]
44 44  * [[VisuAlign>>https://www.nitrc.org/projects/visualign/]]
45 45  * [[ilastik>>https://www.ilastik.org/]]
QUINT_workflow_Plaques.png
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