Attention: The Collaboratory IAM will down for up to 1 hour on Monday, the 7th of July 2025 starting from 5pm CEST (my timezone) for up to 1 hour. Any and all services, which require a user login with an EBRAINS account, will be un-available during that time


Last modified by puchades on 2022/11/02 10:16

From version 62.2
edited by annedevismes
on 2021/06/08 10:23
Change comment: There is no comment for this version
To version 71.1
edited by puchades
on 2021/12/07 10:30
Change comment: There is no comment for this version

Summary

Details

Page properties
Author
... ... @@ -1,1 +1,1 @@
1 -XWiki.annedevismes
1 +XWiki.puchades
Content
... ... @@ -1,5 +1,31 @@
1 -[[image:QUINT_workflow_Plaques.png||style="float:left"]]
1 +(% class="box infomessage" %)
2 +(((
3 +==== Online documentation ====
2 2  
5 +[[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]]
6 +
7 +[[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]]
8 +
9 +[[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]]
10 +
11 +[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]]                                                                   
12 +)))
13 +
14 +
15 +[[image:QUINT_workflow_Plaques.png||height="470" style="float:left" width="1277"]]
16 +
17 +== ==
18 +
19 +== ==
20 +
21 +== ==
22 +
23 +== ==
24 +
25 +== ==
26 +
27 +== ==
28 +
3 3  == (% style="color:#c0392b" %)**Description**(%%) ==
4 4  
5 5  **The QUINT workflow enables an atlas-based analysis of extracted features from histological image sections from the rodent brain by using 3D reference atlases. **
... ... @@ -15,8 +15,9 @@
15 15  
16 16  In combination, the tools facilitate semi-automated quantification, eliminating the need for more time-consuming methods such as stereological analysis with manual delineation of brain regions.
17 17  
18 -[[[[image:Youtube_QUINT.PNG||height="282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
44 +[[[[image:Youtube_QUINT.PNG||height="338" style="float:right" width="600"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
19 19  
46 +[[image:Quint tutorial video pic.png||height="370" style="float:left" width="600"]]
20 20  
21 21  
22 22  
... ... @@ -29,8 +29,6 @@
29 29  
30 30  
31 31  
32 -
33 -
34 34  QUINT workflow video
35 35  
36 36  == (% style="color:#c0392b" %)**Workflow highlights**(%%) ==
Quint tutorial video pic.png
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.puchades
Size
... ... @@ -1,0 +1,1 @@
1 +503.2 KB
Content