Changes for page QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain
Last modified by puchades on 2022/11/02 10:16
From version 62.2
edited by annedevismes
on 2021/06/08 10:23
on 2021/06/08 10:23
Change comment:
There is no comment for this version
Summary
-
Page properties (2 modified, 0 added, 0 removed)
-
Attachments (0 modified, 1 added, 0 removed)
Details
- Page properties
-
- Author
-
... ... @@ -1,1 +1,1 @@ 1 -XWiki.a nnedevismes1 +XWiki.puchades - Content
-
... ... @@ -1,5 +1,31 @@ 1 -[[image:QUINT_workflow_Plaques.png||style="float:left"]] 1 +(% class="box infomessage" %) 2 +((( 3 +==== Online documentation ==== 2 2 5 +[[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]] 6 + 7 +[[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]] 8 + 9 +[[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]] 10 + 11 +[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]] 12 +))) 13 + 14 + 15 +[[image:QUINT_workflow_Plaques.png||height="470" style="float:left" width="1277"]] 16 + 17 +== == 18 + 19 +== == 20 + 21 +== == 22 + 23 +== == 24 + 25 +== == 26 + 27 +== == 28 + 3 3 == (% style="color:#c0392b" %)**Description**(%%) == 4 4 5 5 **The QUINT workflow enables an atlas-based analysis of extracted features from histological image sections from the rodent brain by using 3D reference atlases. ** ... ... @@ -15,8 +15,9 @@ 15 15 16 16 In combination, the tools facilitate semi-automated quantification, eliminating the need for more time-consuming methods such as stereological analysis with manual delineation of brain regions. 17 17 18 -[[[[image:Youtube_QUINT.PNG||height=" 282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]44 +[[[[image:Youtube_QUINT.PNG||height="338" style="float:right" width="600"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]] 19 19 46 +[[image:Quint tutorial video pic.png||height="370" style="float:left" width="600"]] 20 20 21 21 22 22 ... ... @@ -29,8 +29,6 @@ 29 29 30 30 31 31 32 - 33 - 34 34 QUINT workflow video 35 35 36 36 == (% style="color:#c0392b" %)**Workflow highlights**(%%) ==
- Quint tutorial video pic.png
-
- Author
-
... ... @@ -1,0 +1,1 @@ 1 +XWiki.puchades - Size
-
... ... @@ -1,0 +1,1 @@ 1 +503.2 KB - Content