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Last modified by puchades on 2022/11/02 10:16
From version 65.1
edited by sharoncy
on 2021/10/18 09:44
Change comment: There is no comment for this version
To version 72.2
edited by puchades
on 2022/02/07 13:12
Change comment: There is no comment for this version

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2 2  (((
3 -Online documentation: -
3 +==== This collab is describing the use of the software toolchain version of the QUINT workflow. The integrated QUINT service will soon be available here. ====
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6 +[[image:QUINT_workflow_Plaques.png||height="470" style="float:left" width="1277"]]
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27 +==== Online documentation ====
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5 5  [[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]]
6 6  
7 7  [[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]]
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8 8  
9 9  [[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]]
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11 -[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]]                                                                   
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35 +[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]]                                  
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37 +== ==
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15 -[[image:QUINT_workflow_Plaques.png||style="float:left"]]
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17 17  == (% style="color:#c0392b" %)**Description**(%%) ==
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19 19  **The QUINT workflow enables an atlas-based analysis of extracted features from histological image sections from the rodent brain by using 3D reference atlases. **
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30 30  In combination, the tools facilitate semi-automated quantification, eliminating the need for more time-consuming methods such as stereological analysis with manual delineation of brain regions.
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32 -[[[[image:Youtube_QUINT.PNG||height="282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
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55 +[[[[image:Youtube_QUINT.PNG||height="310" style="float:right" width="550"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
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57 +[[[[image:Quint tutorial video pic.png||height="339" style="float:left" width="550"]]>>https://www.youtube.com/watch?v=n-gQigcGMJ0]]
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48 48  QUINT workflow video
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50 50  == (% style="color:#c0392b" %)**Workflow highlights**(%%) ==
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Quint tutorial video pic.png
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