Attention: The Collaboratory IAM will down for up to 1 hour on Monday, the 7th of July 2025 starting from 5pm CEST (my timezone) for up to 1 hour. Any and all services, which require a user login with an EBRAINS account, will be un-available during that time


Last modified by puchades on 2022/11/02 10:16

From version 71.1
edited by puchades
on 2021/12/07 10:30
Change comment: There is no comment for this version
To version 62.2
edited by annedevismes
on 2021/06/08 10:23
Change comment: There is no comment for this version

Summary

Details

Page properties
Author
... ... @@ -1,1 +1,1 @@
1 -XWiki.puchades
1 +XWiki.annedevismes
Content
... ... @@ -1,31 +1,5 @@
1 -(% class="box infomessage" %)
2 -(((
3 -==== Online documentation ====
1 +[[image:QUINT_workflow_Plaques.png||style="float:left"]]
4 4  
5 -[[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]]
6 -
7 -[[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]]
8 -
9 -[[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]]
10 -
11 -[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]]                                                                   
12 -)))
13 -
14 -
15 -[[image:QUINT_workflow_Plaques.png||height="470" style="float:left" width="1277"]]
16 -
17 -== ==
18 -
19 -== ==
20 -
21 -== ==
22 -
23 -== ==
24 -
25 -== ==
26 -
27 -== ==
28 -
29 29  == (% style="color:#c0392b" %)**Description**(%%) ==
30 30  
31 31  **The QUINT workflow enables an atlas-based analysis of extracted features from histological image sections from the rodent brain by using 3D reference atlases. **
... ... @@ -41,9 +41,8 @@
41 41  
42 42  In combination, the tools facilitate semi-automated quantification, eliminating the need for more time-consuming methods such as stereological analysis with manual delineation of brain regions.
43 43  
44 -[[[[image:Youtube_QUINT.PNG||height="338" style="float:right" width="600"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
18 +[[[[image:Youtube_QUINT.PNG||height="282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]]
45 45  
46 -[[image:Quint tutorial video pic.png||height="370" style="float:left" width="600"]]
47 47  
48 48  
49 49  
... ... @@ -56,6 +56,8 @@
56 56  
57 57  
58 58  
32 +
33 +
59 59  QUINT workflow video
60 60  
61 61  == (% style="color:#c0392b" %)**Workflow highlights**(%%) ==
Quint tutorial video pic.png
Author
... ... @@ -1,1 +1,0 @@
1 -XWiki.puchades
Size
... ... @@ -1,1 +1,0 @@
1 -503.2 KB
Content