Changes for page QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain
Last modified by puchades on 2022/11/02 10:16
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... ... @@ -1,18 +1,19 @@ 1 1 (% class="box infomessage" %) 2 2 ((( 3 -==== This collab is describing the use of the software toolchain version of the QUINT workflow. The integrated QUINT service will soon be available here. ==== 4 -))) 3 +==== Online documentation ==== 5 5 6 -[[ image:QUINT_workflow_Plaques.png||height="470"style="float:left" width="1277"]]5 +[[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]] 7 7 8 - ====7 +[[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]] 9 9 10 - ====9 +[[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]] 11 11 12 -== == 11 +[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]] 12 +))) 13 13 14 -== == 15 15 15 +[[image:QUINT_workflow_Plaques.png||height="470" style="float:left" width="1277"]] 16 + 16 16 == == 17 17 18 18 == == ... ... @@ -23,17 +23,6 @@ 23 23 24 24 == == 25 25 26 - 27 -==== Online documentation ==== 28 - 29 -[[QuickNII user documentation>>https://quicknii.readthedocs.io/en/latest/index.html]] 30 - 31 -[[VisuAlign user documentation>>https://visualign.readthedocs.io/en/latest/index.html]] 32 - 33 -[[Ilastik user documentation>>https://nutil.readthedocs.io/en/latest/Ilastik.html]] 34 - 35 -[[Nutil user documentation>>https://nutil.readthedocs.io/en/latest/index.html]] 36 - 37 37 == == 38 38 39 39 == (% style="color:#c0392b" %)**Description**(%%) == ... ... @@ -51,10 +51,9 @@ 51 51 52 52 In combination, the tools facilitate semi-automated quantification, eliminating the need for more time-consuming methods such as stereological analysis with manual delineation of brain regions. 53 53 44 +[[[[image:Youtube_QUINT.PNG||height="282" style="float:left" width="500"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]] 54 54 55 -[[[[image:Youtube_QUINT.PNG||height="310" style="float:right" width="550"]]>>https://www.youtube.com/watch?v=8oeg3qTzLnE]] 56 56 57 -[[[[image:Quint tutorial video pic.png||height="339" style="float:left" width="550"]]>>https://www.youtube.com/watch?v=n-gQigcGMJ0]] 58 58 59 59 60 60 ... ... @@ -68,17 +68,8 @@ 68 68 69 69 70 70 71 - 72 - 73 - 74 - 75 - 76 - 77 - 78 - 79 79 QUINT workflow video 80 80 81 - 82 82 == (% style="color:#c0392b" %)**Workflow highlights**(%%) == 83 83 84 84 (% class="box successmessage" %)
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