Changes for page QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain
Last modified by puchades on 2022/11/02 10:16
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... ... @@ -1,5 +3,3 @@ 1 - 2 - 3 3 (% class="jumbotron" %) 4 4 ((( 5 5 (% class="container" %) ... ... @@ -19,7 +19,7 @@ 19 19 20 20 1. ilastik allows the extraction of labelled features such as cells by segmentation. 21 21 1. QuickNII generates atlas maps customised to match the proportions and cutting plane of the brain sections. 22 -1. Nutil enables quantification and spatial analysis of features by drawing on the output of ilastik and QuickNII. 20 +1. Nutil enables image transformations, in addition to quantification and spatial analysis of features by drawing on the output of ilastik and QuickNII. 23 23 24 24 In combination, the tools facilitate semi-automated quantification, eliminating the need for more time consuming methods such as stereological analysis with manual delineation of brain regions. 25 25