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13	13	=== Open QuickNII and load your images ===
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15		-==== You can also add images ====
	15	+Open the QuickNII program from the .exe file. Once the program opens, click the **Manage data button**.
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17		-[[image:Collaboratory.Apps.Article.Code.ArticleSheet@placeholder.jpg]]
	17	+The QuickNII user manual is found on [[https:~~/~~/www.nitrc.org/docman/?group_id=1341.>>https://www.nitrc.org/docman/?group_id=1341]]
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19		-Photo by David Clode
	19	+The basic steps are:
20	20
21		-==== Or code ====
	21	+- (% style="color:#000000" %)Open one image and use anatomical landmarks to find the approximate anteroposterior position of the section. Select the atlas modality to be overlayed to the image (MRI, Atlas, etc..)
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23		-Code blocks can be added by using the code macro:
	23	+- **The transparency slider** can be used continuously to determine how well the atlas fits the sectionDetermine the sectioning angles (dorso-ventral and medio-lateral)
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25		-{{code language="python"}}
26		-x = 1
27		-if x == 1:
28		- # indented four spaces
29		- print("x is 1.")
30		-{{/code}}
	25	+- Save the positions
	26	+
	27	+