Last modified by puchades on 2022/02/18 13:55
From version 5.4
edited by puchades
on 2020/03/24 18:45
Change comment: There is no comment for this version
To version 5.2
edited by puchades
on 2020/03/24 18:38
Change comment: There is no comment for this version

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... ... @@ -12,16 +12,19 @@
12 12  
13 13  === Open QuickNII and load your images ===
14 14  
15 -Open the QuickNII program from the .exe file. Once the program opens, click the **Manage data button**.
15 +==== You can also add images ====
16 16  
17 -The QuickNII user manual is found on [[https:~~/~~/www.nitrc.org/docman/?group_id=1341.>>https://www.nitrc.org/docman/?group_id=1341]]
17 +[[image:Collaboratory.Apps.Article.Code.ArticleSheet@placeholder.jpg]]
18 18  
19 -The basic steps are:
19 +Photo by David Clode
20 20  
21 -- (% style="color:#000000" %)Open one image and use anatomical landmarks to find the approximate anteroposterior position of the section. Select the atlas modality to be overlayed to the image (MRI, Atlas, etc..)
21 +==== Or code ====
22 22  
23 -- **The transparency slider** can be used continuously to determine how well the atlas fits the sectionDetermine the sectioning angles (dorso-ventral and medio-lateral)
23 +Code blocks can be added by using the code macro:
24 24  
25 -- Save the positions
26 -
27 -
25 +{{code language="python"}}
26 +x = 1
27 +if x == 1:
28 + # indented four spaces
29 + print("x is 1.")
30 +{{/code}}