Last modified by puchades on 2022/02/18 13:55
From version 5.5
edited by puchades
on 2020/03/24 18:46
Change comment: There is no comment for this version
To version 5.4
edited by puchades
on 2020/03/24 18:45
Change comment: There is no comment for this version

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12 12  
13 13  === Open QuickNII and load your images ===
14 14  
15 -Open the QuickNII program from the .exe file. Once the program opens, click the **Manage data button** and load your XML file.
15 +Open the QuickNII program from the .exe file. Once the program opens, click the **Manage data button**.
16 16  
17 17  The QuickNII user manual is found on [[https:~~/~~/www.nitrc.org/docman/?group_id=1341.>>https://www.nitrc.org/docman/?group_id=1341]]
18 18  
19 19  The basic steps are:
20 20  
21 -- (% style="color:#000000" %)Open one image in the beginning of the series and use anatomical landmarks to find the approximate anteroposterior position of the section.     Select the atlas modality to be overlayed to the image (MRI, Atlas, etc..)
21 +- (% style="color:#000000" %)Open one image and use anatomical landmarks to find the approximate anteroposterior position of the section. Select the atlas modality to be overlayed to the image (MRI, Atlas, etc..)
22 22  
23 23  - **The transparency slider** can be used continuously to determine how well the atlas fits the sectionDetermine the sectioning angles (dorso-ventral and medio-lateral)
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