Last modified by puchades on 2022/02/18 13:55
From version 5.6
edited by puchades
on 2020/03/24 18:50
Change comment: There is no comment for this version
To version 5.5
edited by puchades
on 2020/03/24 18:46
Change comment: There is no comment for this version

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16 16  
17 17  The QuickNII user manual is found on [[https:~~/~~/www.nitrc.org/docman/?group_id=1341.>>https://www.nitrc.org/docman/?group_id=1341]]
18 18  
19 ->The idea is to determine the cutting angles (dorso-ventral and medio-lateral) for the whole serie. Once found, apply the same angles to the whole serie.
19 +The basic steps are:
20 20  
21 -**The basic steps are:**
22 -
23 23  - (% style="color:#000000" %)Open one image in the beginning of the series and use anatomical landmarks to find the approximate anteroposterior position of the section.     Select the atlas modality to be overlayed to the image (MRI, Atlas, etc..)
24 24  
25 -- **The transparency slider** can be used continuously to determine how well the atlas fits the section. Determine the sectioning angles (dorso-ventral and medio-lateral) by tilting the atlas.
23 +- **The transparency slider** can be used continuously to determine how well the atlas fits the sectionDetermine the sectioning angles (dorso-ventral and medio-lateral)
26 26  
27 -- Save the positions for this section. You can adjust these later
25 +- Save the positions
28 28  
29 -- Open the next image,
30 30  
31 -