Last modified by jensb on 2023/04/27 14:17
From version 12.1
edited by jensb
on 2023/04/14 17:40
Change comment: There is no comment for this version
To version 31.2
edited by spreizer
on 2023/04/18 10:23
Change comment: There is no comment for this version

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14 14  (((
15 15  = Overview =
16 16  
17 -* This page serves as a central information hub presenting the work done in the SC3 Visualization Framework Use Case.
17 +* This page serves as a central information hub presenting an overview of the work done in the SC3 Visualization Framework Use Case.
18 18  * In this use case, a connection between NEST Desktop, ViSimpl and Insite was realized.
19 -* The setup guides can be found in the user guides of NEST Desktop and ViSimpl:
19 +* The detailed setup guides can be found in the official user guides of NEST Desktop and ViSimpl on ReadTheDocs:
20 20  ** ViSimpl [[https:~~/~~/visimpl-documentation.readthedocs.io/en/latest/06-NestInsite.html>>url:https://visimpl-documentation.readthedocs.io/en/latest/06-NestInsite.html]]
21 21  ** NEST Desktop [[https:~~/~~/nest-desktop.readthedocs.io/en/latest/user/usage-external/usage-with-visimpl.html>>https://nest-desktop.readthedocs.io/en/latest/user/usage-external/usage-with-visimpl.html]]
22 -** Insite [[https:~~/~~/vrgrouprwth.github.io/insite/>>https://vrgrouprwth.github.io/insite/]]
22 +* More documentation regarding the used in-situ recording backend Insite can be found in the Insite user docs: [[https:~~/~~/vrgrouprwth.github.io/insite/>>https://vrgrouprwth.github.io/insite/]]
23 23  
24 -= Usage Video =
24 +(% style="text-align:center" %)
25 +[[image:image-20230414174434-2.png||alt="NEST Desktop Setting up a network with ViSimpl waiting for the results"]]
25 25  
26 -* A video showing the usage can be found [[here>>doc:Video]].
27 +(% style="text-align:center" %)
28 +[[image:image-20230414174907-3.png||alt="NEST Desktop receiving simulation results via Insite while ViSimpl waits"]]
29 +
30 +(% style="text-align:center" %)
31 +[[image:image-20230414175125-4.png||alt="ViSimpl visualizing the simulation results next to NEST Desktop"]]
32 +
33 +
34 +
35 += Preparation (Quickstart Guide) =
36 +
37 +First, download the Docker Compose configuration file for NEST Desktop and Insite.
38 +
39 +(% class="box" %)
40 +(((
41 +##wget https:~/~/raw.githubusercontent.com/nest-desktop/nest-desktop-docker/main/examples/insite/docker-compose.yml##
27 27  )))
28 28  
44 +Then, pull the docker images using Docker Compose.
29 29  
30 -(% class="col-xs-12 col-sm-4" %)
46 +(% class="box" %)
31 31  (((
32 -{{box title="**Contents**"}}
33 -{{toc/}}
34 -{{/box}}
48 +##docker-compose pull##
49 +)))
35 35  
36 -
51 +Afterwards, you can start NEST Desktop (with Insite).
52 +
53 +(% class="box" %)
54 +(((
55 +##docker-compose up##
37 37  )))
57 +
58 +----
59 +
60 +For ViSimpl, download the (binary) AppImage from the [[page>>url:https://vg-lab.es/visimpl/#downloads]], make it executable and then open it.
61 +
62 +(% class="box" %)
63 +(((
64 +##VERSION=1.8.3
65 +wget https:~/~/vg-lab.es/apps/visimpl/latest-release/visimpl-$VERSION-x86_64.AppImage
66 +chmod +x visimpl-$VERSION-x86_64.AppImage
67 +./visimpl-$VERSION-x86_64.AppImage##
38 38  )))
69 +
70 +
71 +
72 += How to use NEST Desktop with ViSimpl (Quickstart Guide) =
73 +
74 +1. In NEST Desktop, make sure that both backends (NEST Simulator and Insite) are running.
75 +1. Run the simulation of the network with Insite as recording backend.
76 +1. In ViSimpl, click on the REST button to get data from Insite (check that you use the correct URL).
77 +1. Now, ViSimpl shows spatial dots representing neurons and spikes are displayed in glowing mode.
78 +
79 += Usage Video =
80 +
81 +A video showing the usage can be found [[here>>doc:Video]].
82 +
83 +{{html}}
84 +<iframe height="386" src="https://drive.ebrains.eu/seafhttp/files/9d70e2c9-1280-4512-a18b-206f48505eff/2023-03-27_NEST_Desktop_ViSimpl_v0.6.mp4" width="685" />
85 +
86 +<style>
87 + iframe {
88 + height: 100vh;
89 + width: 100%;
90 + object-fit: fill; // use "cover" to avoid distortion
91 + position: absolute;
92 + }
93 +</style>
94 +{{/html}}
95 +)))
96 +)))
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