Changes for page SC3 Visualization Framework Use Case
Last modified by jensb on 2023/04/27 14:17
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... ... @@ -14,76 +14,29 @@ 14 14 ((( 15 15 = Overview = 16 16 17 -* This page serves as a central information hub presenting an overview ofthe work done in the SC3 Visualization Framework Use Case.17 +* This page serves as a central information hub presenting the work done in the SC3 Visualization Framework Use Case. 18 18 * In this use case, a connection between NEST Desktop, ViSimpl and Insite was realized. 19 -* The detailedsetup guides can be found in theofficialuser guides of NEST Desktop and ViSimplon ReadTheDocs:19 +* The setup guides can be found in the user guides of NEST Desktop and ViSimpl: 20 20 ** ViSimpl [[https:~~/~~/visimpl-documentation.readthedocs.io/en/latest/06-NestInsite.html>>url:https://visimpl-documentation.readthedocs.io/en/latest/06-NestInsite.html]] 21 21 ** NEST Desktop [[https:~~/~~/nest-desktop.readthedocs.io/en/latest/user/usage-external/usage-with-visimpl.html>>https://nest-desktop.readthedocs.io/en/latest/user/usage-external/usage-with-visimpl.html]] 22 22 * More documentation regarding the used in-situ recording backend Insite can be found in the Insite user docs: [[https:~~/~~/vrgrouprwth.github.io/insite/>>https://vrgrouprwth.github.io/insite/]] 23 23 24 24 (% style="text-align:center" %) 25 -[[image:image-20230414174434-2.png||alt="NEST Desktop Setting up a network with ViSimpl waiting for the results"]] 25 +[[image:image-20230414174434-2.png||alt="NEST Desktop Setting up a network with ViSimpl waiting for the results" height="720" width="1307"]] 26 26 27 +(% class="wikigeneratedid" %) 28 += = 29 + 27 27 (% style="text-align:center" %) 28 -[[image:image-20230414174907-3.png||alt="NEST Desktop receiving simulation results via Insite while ViSimpl waits"]] 31 +[[image:image-20230414174907-3.png||alt="NEST Desktop receiving simulation results via Insite while ViSimpl waits" height="720" width="1307"]] 29 29 30 30 (% style="text-align:center" %) 31 -[[image:image-20230414175125-4.png||alt="ViSimpl visualizing the simulation results next to NEST Desktop"]] 34 +[[image:image-20230414175125-4.png||alt="ViSimpl visualizing the simulation results next to NEST Desktop" height="720" width="1306"]] 32 32 33 -= = 34 - 35 - 36 -= Preparation (Quickstart Guide) = 37 - 38 -First, download the Docker Compose configuration file for NEST Desktop and Insite. 39 - 40 -(% class="box" %) 41 -((( 42 -##wget https:~/~/raw.githubusercontent.com/nest-desktop/nest-desktop-docker/main/examples/insite/docker-compose.yml## 43 -))) 44 - 45 -Then, pull the docker images using Docker Compose. 46 - 47 -(% class="box" %) 48 -((( 49 -##docker-compose pull## 50 -))) 51 - 52 -Afterwards, you can start NEST Desktop (with Insite). 53 - 54 -(% class="box" %) 55 -((( 56 -##docker-compose up## 57 -))) 58 - 59 ----- 60 - 61 -For ViSimpl, download the (binary) AppImage from the [[page>>url:https://vg-lab.es/visimpl/#downloads]], make it executable and then open it. 62 - 63 -(% class="box" %) 64 -((( 65 -##VERSION=1.8.3 66 -wget https:~/~/vg-lab.es/apps/visimpl/latest-release/visimpl-$VERSION-x86_64.AppImage 67 -chmod +x visimpl-$VERSION-x86_64.AppImage 68 -./visimpl-$VERSION-x86_64.AppImage## 69 -))) 70 - 71 -= = 72 - 73 - 74 -= How to use NEST Desktop with ViSimpl (Quickstart Guide) = 75 - 76 -1. In NEST Desktop, make sure that both backends (NEST Simulator and Insite) are running. 77 -1. Run the simulation of the network with Insite as recording backend. 78 -1. In ViSimpl, click on the REST button to get data from Insite (check that you use the correct URL). 79 -1. Now, ViSimpl shows spatial dots representing neurons and spikes are displayed in glowing mode. 80 - 81 -= = 82 - 83 - 36 +(% class="wikigeneratedid" %) 84 84 = Usage Video = 85 85 86 -A video showing the usage can be found [[here>>doc:Video]]. 39 +* A video showing the usage can be found [[here>>doc:Video]]. 87 87 ))) 88 88 89 89