Changes for page SGA2 SP3 UC003 - Temporal Structure in Recorded Ensemble Activity
Last modified by jfioril1 on 2022/05/23 22:36
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... ... @@ -12,30 +12,11 @@ 12 12 ((( 13 13 (% class="col-xs-12 col-sm-8" %) 14 14 ((( 15 -= =Demonstrationof theanalysisof electrophysiologicaldata==15 += What can I find here? = 16 16 17 17 A notebook that demonstrates how to apply the pipeline to a complex dataset. 18 18 \\The aim of this note-book is twofold. Firstly,we aim to demonstrate the advantage of a common and shared data representation format for a challenging and complex electrophysiology dataset. The second aim is to showcase the first part of a pipeline for analysing for population-level data, including parallel spiking activity, paired with and behavioural and cognitive state variables. 19 19 20 -This Collab is aimed at experimental and computational neuroscientists interested in the usage of the Neo and Elephant tools in performing data analysis of spiking data. 21 - 22 -== Executing the pipeline == 23 - 24 -[[image:pipeline_flowchart.png]] 25 - 26 -=== In the HBP Collab (beta) === 27 - 28 -* **Copy the collab drive to your drive space** 29 -** Open the Drive from the left menu 30 -** Select the folders 'pipeline' and 'datasets' 31 -** Select 'Copy', and then 'My Library' from the dropdown 'Other Libraries' 32 - 33 -* **Start a Jupyter Hub instance ** 34 -In another browser, open [[https:~~/~~/lab.ebrains.eu>>url:https://lab.ebrains.eu]] 35 - 36 -* **Run the notebook** 37 -In the Jupyter Hub, navigate to `drive/My Libraries/My Library/XXX.ipynb`, and run the notebook. 38 - 39 39 == License (to discuss) == 40 40 41 41 All text and example data in this collab is licensed under Creative Commons CC-BY 4.0 license. Software code is licensed under a modified BSD license.