Last modified by jfioril1 on 2022/05/23 22:36
From version 28.1
edited by denker
on 2020/04/03 16:59
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To version 41.1
edited by denker
on 2020/04/06 14:13
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Summary

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1 -SGA2 SP3 UC003
1 +SGA2 SP3 UC003 - Temporal Structure in Recorded Ensemble Activity
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2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= Multi-area Multi-sensory Representations in Freely Moving Rats =
5 += Temporal Structure in Recorded Ensemble Activity =
6 6  
7 -Use Case SGA2-SP3-003: Analysis pipeline for representation and analysis of electrophysiological data
7 +**Use Case SGA2-SP3-003: Pipeline for analyzing Temporal structure in recorded Ensemble Activity and related Systems Neuroscience data in association with behavior, cognitive processing and modeling**
8 +
9 +To be discussed Author order, contributions,...:
10 +
11 +Experiments: Julien Fiorilli^^2^^
12 +
13 +Implementation: Regimantas Jurkus^^1^^, Julien Fiorilli^^2^^, Pietro Marchesi^^2^^, Thijs Ruikes^^2^^
14 +
15 +Lead: Michael Denker^^1^^, Sonja Grün^^1^^, Cyril Pennartz^^2^^
16 +
17 +,,1) Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6) and JARA-Institute Brain Structure-Function Relationships (INM-10), Jülich Research Centre, Jülich, Germany,,
18 +
19 +,,2) Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands,,
8 8  )))
9 9  )))
10 10  
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23 23  
24 24  * **Copy the collab drive to your drive space**
25 25  ** Open the Drive from the left menu
26 -** Copy "Demonstrator_Use_Case_SGA2-SP3-003.ipynb" and select 'My Library' from the dropdown 'Other Libraries'
38 +** Select "Demonstrator_Use_Case_SGA2-SP3-003.ipynb", the "Figures" folder, and the "Data" folder
39 +** Copy the selected items, and select the destination 'My Library' from the dropdown 'Other Libraries'
27 27  
28 28  * **Start a Jupyter Hub instance **
29 29  In another browser, open [[https:~~/~~/lab.ebrains.eu>>url:https://lab.ebrains.eu]]
30 30  
31 31  * **Run the notebook**
32 -In the Jupyter Hub, navigate to `drive/My Libraries/My Library/XXX.ipynb`, and run the notebook.
45 +In the Jupyter Hub, navigate to `drive/My Libraries/My Library/Demonstrator_Use_Case_SGA2-SP3-003.ipynb`, and run the notebook.
46 +
33 33  
34 34  == License (to discuss) ==
35 35  
36 36  All text and example data in this collab is licensed under Creative Commons CC-BY 4.0 license. Software code is licensed under a modified BSD license.
37 37  
52 +[[image:https://i.creativecommons.org/l/by/4.0/88x31.png||style="float:left"]]
53 +
38 38  == Acknowledgments ==
39 39  
40 40  This open source software code was developed in part or in whole in the Human Brain Project, funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement No. 785907 (Human Brain Project SGA2).
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58 +
59 +[[image:collage.png]]
41 41  )))
42 42  
43 43  
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