Changes for page SGA3 D1.2 Showcase 1
Last modified by fousekjan on 2022/07/04 18:31
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... ... @@ -12,18 +12,13 @@ 12 12 ((( 13 13 (% class="col-xs-12 col-sm-8" %) 14 14 ((( 15 - TheShowcaseis implementedasaseries of interactive Jupyter notebooks covering theindividual logicalsteps and can be accessed in a dedicated public EBRAINS collab.15 +== Virtual ageing trajectories: 1000BRAINS cohort == 16 16 17 17 18 - TheEBRAINS collab consists of interlinkedDrive, Bucket, Wiki, andLab. The Drive provides small file storage andcontains thenotebooks and all supportingcode. The Bucket is a large file storage service and holds thepre-computedresults of the extensive parameter sweeps and model optimizations to allow skippingthecomputationally demanding steps. The documentationof the showcase implementation is collectedin theWiki. The Lab service is aninstance of JupyterLab—aninteractivecomputing environment where the notebookscan be run and worked with.18 +== Brain region variance: incorporating receptor densities == 19 19 20 20 21 -The notebooks in this collab will load all required Python modules including Siibra and The Virtual Brain, and the interfaces for launching the computationally demanding parts in the HPC infrastructure. Running the notebooks requires an EBRANS account with permissions to access the Lab and the Knowledge Graph API. In addition, to be able to interact with the HPC infrastructure, the user has to have access to an active allocation on the corresponding FENIX site. 22 22 23 - 24 -== == 25 - 26 - 27 27 ))) 28 28 29 29
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