Changes for page SGA3 D1.5 Showcase 1

Last modified by gorkazl on 2023/11/13 14:27
From version 9.1
edited by fousekjan
on 2023/09/25 16:29
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To version 9.2
edited by gorkazl
on 2023/10/08 18:28
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5 -= Final demonstrator software =
5 += Final demonstrator software =
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7 7  SGA3 D1.5 - Showcase 1: "Degeneracy in neuroscience - when is Big Data big enough"
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15 -The Showcase is implemented as a series of interactive Jupyter notebooks covering the individual logical steps and can be accessed in a dedicated public EBRAINS collab.
15 +The Showcase is implemented as a series of interactive Jupyter Notebooks covering the individual logical steps and can be accessed in a dedicated public EBRAINS collab.
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17 -The EBRAINS collab is a virtual environment that interlinks the Drive, Bucket, Wiki, and Lab services. The Drive provides storage for small files. It contains the notebooks and all the supporting code. The Bucket is a storage service for larger files. It holds the pre-computed results from the extensive parameter sweeps and model optimizations to allow skipping the computationally demanding steps. The documentation of the showcase implementation is collected in the Wiki. The Lab service is an instance of JupyterLab—an interactive computing environment where the notebooks can be run and worked with.
17 +An EBRAINS collab (as this one dedicated to the SGA3 D1.5 Deliverable) is a virtual environment providing access to a few interlinked services: Drive, Bucket, Wiki, and Lab. The //Drive// provides storage for small files. It is a "local" filesystem in which the documentation, the notebooks and all the supporting code of a collab are placed. The //Bucket// is a storage service for larger files. Here, it holds the pre-computed results from the extensive parameter sweeps and model optimizations to allow skipping the computationally demanding steps. The documentation of the showcase implementation is collected in the //Wiki//. The //Lab// service is an instance of JupyterLab—an interactive computing environment where the notebooks can be run and worked with.
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19 19  The Jupyter notebooks in this collab will load all required Python modules including Siibra and The Virtual Brain, and the interfaces for launching the computationally demanding parts in the HPC infrastructure.
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