Last modified by robing on 2022/03/25 09:55
From version 23.1
edited by denker
on 2020/04/03 16:50
Change comment: There is no comment for this version
To version 22.1
edited by denker
on 2020/04/03 16:34
Change comment: There is no comment for this version

Summary

Details

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Content
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4 4  (((
5 5  = (% style="color:inherit" %)Slow Wave Analysis Pipeline(%%) =
6 6  
7 -(% class="wikigeneratedid" id="HUseCaseSGA2-SP3-002:IntegratingmultiscaledataA0inareproducibleandadaptablepipeline" %)
8 -(% style="color:inherit; font-size:24px" %)Use Case SGA2-SP3-002: Integrating multi-scale data in a reproducible and adaptable pipeline
7 += (% style="color:inherit; font-size:24px" %)Use Case SGA2-SP3-002: Integrating multiscale data in a reproducible and adaptable pipeline(%%) =
9 9  )))
10 10  )))
11 11  
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13 13  (((
14 14  (% class="col-xs-12 col-sm-8" %)
15 15  (((
16 -== Flexible workflows to generate multi-scale analysis scenarios ==
15 += What can I find here? =
17 17  
18 -This Collab is aimed at experimental and computational neuroscientists interested in the usage of the Neo and Elephant tools in performing data analysis of spiking data.
17 +...
19 19  
19 += Who has access? =
20 +
21 +Describe the audience of this collab.
22 +
20 20  == Executing the pipeline ==
21 21  
22 22  [[image:pipeline_flowchart.png]]
23 23  
24 -=== In the collab (beta) ===
27 +=== in the collab (beta) ===
25 25  
26 26  * **Copy the collab drive to your drive space**
27 27  ** Open the Drive from the left menu
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48 48  ** Provenance Tracking
49 49  ** HPC support
50 50  
51 -=== Local execution ===
54 +=== locally ===
52 52  
53 53  * **Get the code**
54 54  The source code of the pipeline is available via Github: [INM-6/wavescalephant]('https:~/~/github.com/INM-6/wavescalephant') and can be cloned to your machine ([how to use Github]()).
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83 83  
84 84  All text and example data in this collab is licensed under Creative Commons CC-BY 4.0 license. Software code is licensed under a modified BSD license.
85 85  
89 +(% class="wikigeneratedid" %)
86 86  == Acknowledgments ==
87 87  
88 88  This open source software code was developed in part or in whole in the Human Brain Project, funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement No. 785907 (Human Brain Project SGA2).