Last modified by robing on 2022/03/25 09:55
From version 23.1
edited by denker
on 2020/04/03 16:50
Change comment: There is no comment for this version
To version 26.1
edited by denker
on 2020/04/03 17:28
Change comment: There is no comment for this version

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5 5  = (% style="color:inherit" %)Slow Wave Analysis Pipeline(%%) =
6 6  
7 7  (% class="wikigeneratedid" id="HUseCaseSGA2-SP3-002:IntegratingmultiscaledataA0inareproducibleandadaptablepipeline" %)
8 -(% style="color:inherit; font-size:24px" %)Use Case SGA2-SP3-002: Integrating multi-scale data in a reproducible and adaptable pipeline
8 +(% style="color:inherit; font-size:24px" %)**Use Case SGA2-SP3-002: Integrating multi-scale data in a reproducible and adaptable pipeline**
9 +
10 +To be discussed Author order, contributions,...:
11 +
12 +Experiments: ...?
13 +
14 +Implementation: Robin Gutzen^^1,*^^, Elena Pastorelli^^2,*^^, ...
15 +
16 +Lead: Michael Denker^^1^^, Pier Stanislao Paolucci^^2^^
17 +
18 +,,1) Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6) and JARA-Institute Brain Structure-Function Relationships (INM-10), Jülich Research Centre, Jülich, Germany,,
19 +
20 +,,2) Dipartimento di Fisica, Università di Cagliari and INFN Sezione di Cagliari, Italy,,
21 +
22 +
9 9  )))
10 10  )))
11 11  
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29 29  ** Select 'Copy', and then 'My Library' from the dropdown 'Other Libraries'
30 30  
31 31  * **Start a Jupyter Hub instance **
32 -copy the URL to another browser page: 'jupyterhub-preview.apps-dev.hbp.eu'
33 -
46 +In another browser, open [[https:~~/~~/lab.ebrains.eu>>https://lab.ebrains.eu]]
47 +
34 34  * **Edit the config files**
35 35  Each stage has a config file to specify which analysis/processing blocks to execute and which parameters to use. General and specific information about the blocks and parameters can found in the README and config files. The default values are set for an example dataset (ECoG, anesthetized mouse, IDIBAPS [ref]).
36 36  ** stage01_data_entry: [README.md](), [config.yaml]()