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2	2	(((
3	3	(% class="container" %)
4	4	(((
5		-= (% style="--darkreader-inline-color:inherit; color:inherit" %)Slow Wave Analysis Pipeline(%%) =
	5	+= (% style="--darkreader-inline-color:inherit; color:inherit" %)[[INM-6/wavescalephant>>https://github.com/INM-6/wavescalephant]]Slow Wave Analysis Pipeline(%%) =
6	6
7	7	(% class="wikigeneratedid" id="HUseCaseSGA2-SP3-002:IntegratingmultiscaledataA0inareproducibleandadaptablepipeline" %)
8	8	(% style="--darkreader-inline-color:inherit; color:inherit; font-size:24px" %)**Use Case SGA2-SP3-002 KR3.2: Integrating multi-scale data in a reproducible and adaptable pipeline**
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36	36	This Collab is aimed at experimental and computational neuroscientists interested in the usage of the [[Neo>>https://neo.readthedocs.io/en/stable/]] and [[Elephant>>https://elephant.readthedocs.io/en/latest/]] tools in performing data analysis of spiking data.
37	37	Here, the collab illustrates the tool usage with regards to KR3.2, investigating sleep, anesthesia, and the transition to wakefulness.
38	38
	39	+[[image:https://github.githubassets.com/images/modules/logos_page/GitHub-Mark.png||height="25" style="float:left" width="25"]]//[[INM-6/wavescalephant>>https://github.com/INM-6/wavescalephant]]//
	40	+
39	39	== How the Pipeline works ==
40	40
41	41	The design of the pipeline aims at interfacing a variety of general and specific analysis and processing steps in a flexible modular manner. Hence, it enables the pipeline to adapt to diverse types of data (e.g., electrical ECoG, or optical Calcium Imaging recordings) and to different analysis questions. This makes the analyses a) more reproducible and b) comparable amongst each other since they rely on the same stack of algorithms and any differences in the analysis are fully transparent.