Changes for page Subcellular Modeling and Simulation services
Last modified by oliviaeriksson on 2022/12/13 14:50
From version 4.7
edited by oliviaeriksson
on 2022/11/24 11:37
on 2022/11/24 11:37
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To version 4.3
edited by oliviaeriksson
on 2022/11/24 11:17
on 2022/11/24 11:17
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... ... @@ -3,6 +3,8 @@ 3 3 (% class="container" %) 4 4 ((( 5 5 = Subcellular Modeling and Simulation services = 6 + 7 += = 6 6 ))) 7 7 ))) 8 8 ... ... @@ -20,23 +20,15 @@ 20 20 21 21 [1] Lubitz, T., Hahn, J., Bergmann, F.T., Noor, E.,. Klipp, E, Liebermeister, W. (2016). SBtab: A flexible table format for data exchange in systems biology. Bioinformatics, 15;32(16), 2559-61. 22 22 23 -** [[Golden paragraph>>https://wiki.ebrains.eu/bin/view/Collabs/technical-coordination/EBRAINS%20components/]]**25 +**Source Code**: 24 24 25 - === **SourceCode**===27 +Source code for model processing and Bayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/uqsa/>>https://github.com/icpm-kth/uqsa/]]); 26 26 27 - Sourcecode for modelprocessingandBayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/uqsa/>>https://github.com/icpm-kth/uqsa/]], mirrored);29 +**Documentation: **Documentation for** **modelling workflow with Bayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/>>url:https://github.com/icpm-kth/]]) 28 28 29 - ===**Documentation**===31 +**Examples**: Jupyter notebook example of modelling workflow with Bayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/>>url:https://github.com/icpm-kth/]] ) 30 30 31 -Documentation for** **modelling workflow with Bayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/>>url:https://github.com/icpm-kth/]]) 32 - 33 -=== **Examples** === 34 - 35 -Jupyter notebook example of modelling workflow with Bayesian parameter estimation ([[https:~~/~~/github.com/icpm-kth/>>url:https://github.com/icpm-kth/]] ) 36 - 37 -=== **Publication** === 38 - 39 -Santos, Pajo, et al (2021), Neuroinformatics; **20**, 241–259, [[https:~~/~~/doi.org/10.1007/s12021-021-09546-3>>url:https://doi.org/10.1007/s12021-021-09546-3]] ; Eriksson, et al (2019), Bioinformatics, 35(2), 284-292,[[ >>url:https://doi.org/10.1093/bioinformatics/bty607]][[https:~~/~~/doi.org/10.1093/bioinformatics/bty607>>url:https://doi.org/10.1093/bioinformatics/bty607]]__; __Church, et al (2021),__ __//eLife// **10**:e68164, [[https:~~/~~/doi.org/10.7554/eLife.68164>>url:https://doi.org/10.7554/eLife.68164]] 33 +**Publication**: Santos, Pajo, et al (2021), Neuroinformatics; **20**, 241–259, [[https:~~/~~/doi.org/10.1007/s12021-021-09546-3>>url:https://doi.org/10.1007/s12021-021-09546-3]] ; Eriksson, et al (2019), Bioinformatics, 35(2), 284-292,[[ >>url:https://doi.org/10.1093/bioinformatics/bty607]][[https:~~/~~/doi.org/10.1093/bioinformatics/bty607>>url:https://doi.org/10.1093/bioinformatics/bty607]]__; __Church, et al (2021),__ __//eLife// **10**:e68164, [[https:~~/~~/doi.org/10.7554/eLife.68164>>url:https://doi.org/10.7554/eLife.68164]] 40 40 ))) 41 41 42 42