Changes for page EBRAINS Swedish Node Workshop 2025: NEST Tutorials
Last modified by spreizer on 2025/08/26 09:19
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... ... @@ -16,25 +16,27 @@ 16 16 17 17 **Instructor**: Sebastian Spreizer, PhD, University of Trier and Research Center Jülich 18 18 19 -- [[Abstract>>url:https://wiki.ebrains.eu/bin/view/Collabs/swedish-node-nest-tutorials/About/]]19 +- [[Tutorial abstract>>url:https://wiki.ebrains.eu/bin/view/Collabs/swedish-node-nest-tutorials/About/]] 20 20 21 21 22 22 The tutorial is composed of three parts in which the user learns to simulate with NEST step by step. 23 23 24 24 25 -=== =Time schedule ====25 +=== Time schedule === 26 26 27 27 |(% style="width:84px" %)9 - 11|(% style="width:235px" %)NEST Desktop|(% style="width:541px" %)[[https:~~/~~/nest-desktop.readthedocs.org/>>https://nest-desktop.readthedocs.org/]] 28 -|(% style="width:84px" %)12 - 1 4|(% style="width:235px" %)NEST Simulator|(% style="width:541px" %)[[https:~~/~~/nest-simulator.readthedocs.org/>>https://nest-simulator.readthedocs.org/]]29 -|(% style="width:84px" %)1 4- 17|(% style="width:235px" %)NESTML|(% style="width:541px" %)[[https:~~/~~/nestml.readthedocs.org/>>https://nestml.readthedocs.org/]]28 +|(% style="width:84px" %)12 - 15|(% style="width:235px" %)NEST Simulator|(% style="width:541px" %)[[https:~~/~~/nest-simulator.readthedocs.org/>>https://nest-simulator.readthedocs.org/]] 29 +|(% style="width:84px" %)15 - 18|(% style="width:235px" %)NESTML|(% style="width:541px" %)[[https:~~/~~/nestml.readthedocs.org/>>https://nestml.readthedocs.org/]] 30 30 31 +=== 1) NEST Desktop === 31 31 32 - ====Descriptions====33 +The first part of the tutorial, we look at NEST Desktop. As a goal we will create and analyze a balanced two-population network. 33 33 34 - 1)The firstpart of thetutorial, welookatNEST Desktop. Asa goalwe will create and analyzeabalanced two-populationnetwork.35 +* [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nest-desktop>>https://wiki.ebrains.eu/bin/view/Collabs/nest-desktop]] 35 35 37 +=== 2) NEST Simulator === 36 36 37 - 2)The tutorial will then turn to Jupyter (Python) notebooks where we will start by creating a spiking neurons. Here, we learn advanced steps to write code with NEST Simulation syntax. The scripting codes allow us to customize sophisticated use cases with NEST simulations. Examples are:39 +The tutorial will then turn to Jupyter (Python) notebooks where we will start by creating a spiking neurons. Here, we learn advanced steps to write code with NEST Simulation syntax. The scripting codes allow us to customize sophisticated use cases with NEST simulations. Examples are: 38 38 39 39 * neuronal dynamics 40 40 * large scale networks, ... ... @@ -41,12 +41,12 @@ 41 41 * networks of spatial neurons 42 42 * using plasticity 43 43 46 +=== 3) NESTML === 44 44 45 - 3)The last part is using NESTML to create custom neuron and synapse models for NEST Simulator. A functional plasticity rule will then be introduced into the balanced E/I network to implement a biologically realistic version of reinforcement learning. This will be done by formulating the learning model in the NESTML language syntax, and using the associated toolchain to generate code for NEST [4].48 +The last part is using NESTML to create custom neuron and synapse models for NEST Simulator. A functional plasticity rule will then be introduced into the balanced E/I network to implement a biologically realistic version of reinforcement learning. This will be done by formulating the learning model in the NESTML language syntax, and using the associated toolchain to generate code for NEST [4]. 46 46 47 47 * [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials>>https://wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials]] 48 48 49 - 50 50 51 51 ))) 52 52