Last modified by spreizer on 2025/08/26 09:19
From version 46.1
edited by spreizer
on 2025/08/23 20:20
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To version 37.3
edited by spreizer
on 2025/08/23 20:08
Change comment: There is no comment for this version

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21 21  - [[Tutorial abstract>>url:https://wiki.ebrains.eu/bin/view/Collabs/swedish-node-nest-tutorials/About/]]
22 22  
23 23  
24 -The tutorial is composed of three modules in which the user learns to simulate with NEST step by step.
24 +The tutorial is composed of three parts in which the user learns to simulate with NEST step by step.
25 25  
26 26  
27 27  === Time schedule ===
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31 31  |(% style="width:191px" %)13 - 14.30|(% style="width:220px" %)NEST Simulator|(% style="width:422px" %)[[https:~~/~~/nest-simulator.readthedocs.org/>>https://nest-simulator.readthedocs.org/]]
32 32  |(% style="width:191px" %)15 - 16.30|(% style="width:220px" %)NESTML|(% style="width:422px" %)[[https:~~/~~/nestml.readthedocs.org/>>https://nestml.readthedocs.org/]]
33 33  
34 -(% class="wikigeneratedid" %)
35 -Link to use NEST Desktop: [[https:~~/~~/nest-desktop.apps.ebrains.eu/>>https://nest-desktop.apps.ebrains.eu/]]
34 +(% style="color:#1a202c; font-family:inherit; font-size:max(23px, min(27px, 15.8889px + 0.925926vw))" %)How to run NEST tutorials on EBRAINS lab?
36 36  
37 -=== (% style="color:#1a202c; font-family:inherit; font-size:max(23px, min(27px, 15.8889px + 0.925926vw))" %)How to run NEST tutorials on EBRAINS lab?(%%) ===
38 -
39 -1. (((
40 -Go to [[https:~~/~~/lab.jsc.ebrains.eu>>https://lab.jsc.ebrains.eu]]
41 -)))
36 +1. Go to [[https:~~/~~/lab.ebrains.eu>>https://lab.ebrains.eu]]
42 42  1. Change drive folder to `/drive/My Libraries/`.
43 43  1. (((
44 -Next, clone a repo from the remote Git repository "[[https:~~/~~/gitlab.ebrains.eu/spreizer/nest-tutorials-2025.git>>https://gitlab.ebrains.eu/spreizer/nest-tutorials-2025.git]]" (Click on [[image:1755972938026-462.png||height="30" width="28"]]).
39 +Next, clone a repo from the remote Git repository "[[https:~~/~~/gitlab.ebrains.eu/spreizer/nest-tutorials-2025.git>>https://gitlab.ebrains.eu/spreizer/nest-tutorials-2025.git]]" (See red arrow).
45 45  
46 46  
47 -[[image:1755972871032-845.png||data-xwiki-image-style-alignment="center"]]
42 +[[image:https://wiki.ebrains.eu/bin/download/Collabs/nestml-tutorials/WebHome/1753784762571-499.png?rev=1.1||alt="1753784762571-499.png" data-xwiki-image-style-alignment="center"]]
48 48  
44 +
45 +{{info}}
46 +If you want to have it persistently, cloned it into your drive folder "/drive/My Libraries/".
47 +{{/info}}
48 +
49 49  
50 50  )))
51 51  1. (((
52 -After cloning, you find tutorials in `nest-tutorials-2025` folders.
52 +After cloning, you can find tutorials in respective folders.
53 53  
54 +
54 54  
55 55  )))
56 56  1. (((
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63 63  )))
64 64  1. Have fun with it!
65 65  
66 -=== Modules ===
67 67  
68 +=== 1) NEST Desktop ===
68 68  
69 -(% class="wikigeneratedid" %)
70 -**1) NEST Desktop**
71 -
72 72  The first part of the tutorial, we look at NEST Desktop.  As a goal we will create and analyze a balanced two-population network.
73 73  
72 +[[https:~~/~~/nest-desktop.apps.ebrains.eu/>>https://nest-desktop.apps.ebrains.eu/]]
73 +
74 74  More information: [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nest-desktop>>https://wiki.ebrains.eu/bin/view/Collabs/nest-desktop]]
75 75  
76 +=== 2) NEST Simulator ===
76 76  
77 -(% class="wikigeneratedid" id="H329NESTML" %)
78 -**2) NEST Simulator**
79 -
80 80  The tutorial will then turn to Jupyter (Python) notebooks where we will start by creating spiking neurons. Here, we learn advanced steps to write code with NEST Simulation syntax. The scripting codes allow us to customize sophisticated use cases with NEST simulations. How to run examples on EBRAINS lab can be found here:
81 81  
82 82  More examples: [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nest-simulator-examples/>>https://wiki.ebrains.eu/bin/view/Collabs/nest-simulator-examples/]]
83 83  
82 +=== 3) NESTML ===
84 84  
85 -**3) NESTML**
84 +=== ===
86 86  
87 -
88 88  The last part is using NESTML to create custom neuron and synapse models for NEST Simulator. This will be done by formulating the learning model in the NESTML language syntax, and using the associated toolchain to generate code for NEST Simulator.
89 89  
90 90  More tutorials: [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials>>https://wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials]]
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