Version 27.1 by spreizer on 2025/07/30 12:20
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spreizer 11.1 5 = NEST Tutorials =
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spreizer 11.1 7 EBRAINS Swedish Node, Stockholm, 25/08/25 - 27/08/25
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spreizer 27.1 15 (% class="wikigeneratedid" id="HFromsingle-cellmodelingtolarge-scalenetworkdynamicswithNESTSimulator" style="text-align: center;" %)
16 **From single-cell modeling to large-scale network dynamics with NEST Simulator**
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spreizer 14.2 19 **Instructor**: Sebastian Spreizer, PhD, University of Trier and Research Center Jülich
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spreizer 20.2 21 - [[Tutorial abstract>>url:https://wiki.ebrains.eu/bin/view/Collabs/swedish-node-nest-tutorials/About/]]
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spreizer 16.3 24 The tutorial is composed of three parts in which the user learns to simulate with NEST step by step.
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spreizer 18.1 27 === Time schedule ===
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spreizer 14.2 29 |(% style="width:84px" %)9 - 11|(% style="width:235px" %)NEST Desktop|(% style="width:541px" %)[[https:~~/~~/nest-desktop.readthedocs.org/>>https://nest-desktop.readthedocs.org/]]
spreizer 16.5 30 |(% style="width:84px" %)12 - 15|(% style="width:235px" %)NEST Simulator|(% style="width:541px" %)[[https:~~/~~/nest-simulator.readthedocs.org/>>https://nest-simulator.readthedocs.org/]]
31 |(% style="width:84px" %)15 - 18|(% style="width:235px" %)NESTML|(% style="width:541px" %)[[https:~~/~~/nestml.readthedocs.org/>>https://nestml.readthedocs.org/]]
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spreizer 18.2 33 === 1) NEST Desktop ===
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spreizer 18.1 35 The first part of the tutorial, we look at NEST Desktop.  As a goal we will create and analyze a balanced two-population network.
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spreizer 24.1 37 * [[https:~~/~~/nest-desktop.apps.ebrains.eu/>>https://nest-desktop.apps.ebrains.eu/]]
spreizer 16.6 38 * [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nest-desktop>>https://wiki.ebrains.eu/bin/view/Collabs/nest-desktop]]
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spreizer 18.2 40 === 2) NEST Simulator ===
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spreizer 22.1 42 The tutorial will then turn to Jupyter (Python) notebooks where we will start by creating spiking neurons. Here, we learn advanced steps to write code with NEST Simulation syntax. The scripting codes allow us to customize sophisticated use cases with NEST simulations. How to run examples on EBRAINS lab can be found here:
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spreizer 22.1 44 * [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nest-simulator-examples/>>https://wiki.ebrains.eu/bin/view/Collabs/nest-simulator-examples/]]
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spreizer 18.2 46 === 3) NESTML ===
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spreizer 25.1 48 The last part is using NESTML to create custom neuron and synapse models for NEST Simulator. This will be done by formulating the learning model in the NESTML language syntax, and using the associated toolchain to generate code for NEST Simulator.
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spreizer 16.3 50 * [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials>>https://wiki.ebrains.eu/bin/view/Collabs/nestml-tutorials]]
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spreizer 27.1 55 [[image:https://www.ebrains.eu/flags/4x3/se.svg||alt="Sweden's flag" data-xwiki-image-style-alignment="center" height="225" width="300"]]
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60 {{box title="**Contents**"}}
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