Last modified by ldomide on 2024/04/08 12:55
From version 26.1
edited by ldomide
on 2022/03/22 18:09
Change comment: Migrated property [owner] from class [Collaboratory.Apps.Collab.Code.CollabClass]
To version 7.2
edited by ldomide
on 2020/06/26 12:35
Change comment: There is no comment for this version

Summary

Details

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Title
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1 -Co-Simulation The Virtual Brain Multiscale
1 +The Virtual Brain Multiscale
Content
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2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= (% style="color:inherit" %)TVB Co-Simulation {{html}}<iframe width="302" height="170" src="https://www.youtube.com/embed/6hEuvxD7IDk?list=PLVtblERyzDeLcVv4BbW3BvmO8D-qVZxKf" frameborder="0" allow="accelerometer; autoplay; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>{{/html}}  (%%) =
5 += (% style="color:inherit" %)TVB Co-Simulation(%%) =
6 6  
7 -
8 8  (% style="color:inherit" %)Multiscale: TVB - NEST
9 -
10 -(% style="color:inherit" %)Authors: (%%)D. Perdikis, L. Domide, J. Mersmann, M. Schirner, P. Ritter(% style="color:inherit" %)
11 11  )))
12 12  )))
13 13  
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15 15  (((
16 16  (% class="col-xs-12 col-sm-8" %)
17 17  (((
18 -For more details on TVB see:
15 +== Contributors ==
19 19  
20 -* TVB Dedicated Wiki [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/the-virtual-brain/>>url:https://wiki.ebrains.eu/bin/view/Collabs/the-virtual-brain/]]
21 -* TVB in HBP User Story [[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/user-story-tvb/>>url:https://wiki.ebrains.eu/bin/view/Collabs/user-story-tvb/]]
17 +Dionysios Perdikis, Lia Domide, Jochen Mersmann, Michael Schirner, Petra Ritter
22 22  
23 23  == Use our Jupyter Hub setup online ==
24 24  
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44 44  
45 45  This is the path recommended for people working closely with tvb-nest. They are able to download it in their local work env and code freely and fast with it.
46 46  
47 -== Running TVB-NEST jobs on CSCS infrastructure from HBP collab ==
43 +== Running tvb-nest jobs on CSCS infrastructure from HBP collab ==
48 48  
49 49  The CSCS and HBP Collab deployment of tvb-nest is a good example to show how tvb-nest can run with an HPC backend. This will be efficient when the simulation jobs are very large. From our experience, with small jobs, the stage-in/out time is considerable, and then the user might be better with just a local run. Also, this deployment requires that **the user have an active CSCS personal account**. More details on how to use this deployment can be found in this movie: [[https:~~/~~/drive.google.com/open?id=1osF263FK_NjhZcBJfpSy-F7qkbYs3Q-E>>url:https://drive.google.com/open?id=1osF263FK_NjhZcBJfpSy-F7qkbYs3Q-E]]
50 50  
Collaboratory.Apps.Collab.Code.CollabClass[0]
Description
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1 -Multiscale Co-Simulation with The Virtual Brain (TVB) and NEST.
2 -This space contains tutorials for configuring and running in HBP Collab simulations with TVB simulator in combination with the NEST simulator, and do co-simulations.
1 +Co-Simulation The Virtual Brain-multiscale. This space contains tutorials for configuring and running in HBP Collab simulations with TVB simulator in combination with the NEST simulator, and do a co-simulation. Full Brain Modeling. Human. Animal. EEG, MEG, SEEG, iEEG, BOLD. Large Scale Connectivity. Surface Simulations. TVB-multiscale co-simulation
XWiki.XWikiComments[0]
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1 -XWiki.ldomide
Comment
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1 -Check this movie on tvb-multiscale https://www.youtube.com/watch?v=6hEuvxD7IDk&feature=youtu.be
Date
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1 -2020-07-27 21:56:05.0
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