Last modified by michaels on 2022/05/23 22:24
From version 11.1
edited by michaels
on 2020/05/06 13:43
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To version 7.1
edited by michaels
on 2020/05/04 16:06
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Summary

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1 -tool|CHARITE|brain network model|brain simulation|tvb|high performance|parallel|hpc|supercomputer|connectome|functional connectivity|the virtual brain
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5 5  = TVB C ~-~- High-speed parallel brain network models =
6 6  
7 7  A fast implementation of The Virtual Brain brain network simulator
8 -
9 -[[image:fasttvb.png]]
10 10  )))
11 11  )))
12 12  
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21 21  ** upload model data to the supercomputer
22 22  ** set up and run simulations
23 23  ** download simulation results
24 -
25 -== How do I use it? ==
26 -
27 -* the simulation code is implemented as a Docker container
28 -* the container is executed on supercomputers and operated via IPython notebooks
29 -* Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb"
30 -* To use the notebook, download it onto your local filesystem, create a new Collab and upload it there.
31 -* Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook.
32 -* Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'"
33 33  )))
34 34  
35 35  
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