Changes for page TVB C -- High-speed parallel brain network models
Last modified by michaels on 2022/05/23 22:24
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... ... @@ -1,1 +1,0 @@ 1 -tool|CHARITE|brain network model|brain simulation|tvb|high performance|parallel|hpc|supercomputer|connectome|functional connectivity|the virtual brain - Content
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... ... @@ -6,9 +6,7 @@ 6 6 7 7 A fast implementation of The Virtual Brain brain network simulator 8 8 9 -[[Direct link to notebook>>https://drive.ebrains.eu/#my-libs/lib/f5e40b3b-91cb-4671-9178-4d2673ad8ac4]] 10 - 11 -[[image:4144.jpeg]] 9 +[[image:fasttvb.png]] 12 12 ))) 13 13 ))) 14 14 ... ... @@ -16,15 +16,8 @@ 16 16 ((( 17 17 (% class="col-xs-12 col-sm-8" %) 18 18 ((( 19 -= =Quicklinks==17 += What can I find here? = 20 20 21 -* [[TVB on EBRAINS (Short Version)>>https://www.youtube.com/watch?v=_G_DjRb1ams&feature=youtu.be||rel="noopener noreferrer" target="_blank"]] 22 -* [[TVB on EBRAINS (Long Version)>>https://www.youtube.com/watch?v=eZrh6ztGFAY&feature=youtu.be||rel="noopener noreferrer" target="_blank"]] 23 -* [[TVB on EBRAINS (Mini Videos)>>https://www.youtube.com/playlist?list=PLVtblERyzDeLcVv4BbW3BvmO8D-qVZxKf||rel="noopener noreferrer" target="_blank"]] 24 -* [[User Story>>https://wiki.ebrains.eu/bin/view/Collabs/user-story-tvb/||rel="noopener noreferrer" target="_blank"]] 25 - 26 -== What can I find here? == 27 - 28 28 * an IPython notebook that describes how to 29 29 ** pull the TVB-C container into one of the associated supercomputers using PyUnicore 30 30 ** upload model data to the supercomputer ... ... @@ -39,54 +39,9 @@ 39 39 * To use the notebook, download it onto your local filesystem, create a new Collab and upload it there. 40 40 * Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook. 41 41 * Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'" 42 - 43 -== Metadata == 44 - 45 -|=((( 46 -|=Category|tool 47 -|=Tags|((( 48 -* [[brain-network-model>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 49 -* [[TVB>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 50 -* [[high-performance>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 51 -* [[parallel>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 52 -* [[HPC>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 53 -* [[supercomputer>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 54 -* [[brain-simulation>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 55 -* [[connectome>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 56 -* [[functional-connectivity>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 57 -* [[The-Virtual-Brain>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 58 58 ))) 59 -|=Partners|((( 60 -* Charité Universitätsmedizin Berlin [[CHARITE>>url:https://services.humanbrainproject.eu/software-catalog/catalog/?ctx=97d59245-adce-42c4-8b50-d22587071fcd&ctxstate=search%2Ctvb]] 61 -))) 62 -|=Maintainers|((( 63 -* [[Petra Ritter>>path:mailto:petra.ritter@charite.de]] 64 -* [[Michael Schirner>>path:mailto:michael.schirner@charite.de]] 65 -))) 66 -|=Homepage|[[https:~~/~~/hub.docker.com/r/thevirtualbrain/fast_tvb>>url:https://hub.docker.com/r/thevirtualbrain/fast_tvb]] 67 -|=Documentation|[[https:~~/~~/collab.humanbrainproject.eu/#/collab/65304/nav/444404>>url:https://collab.humanbrainproject.eu/#/collab/65304/nav/444404]] 68 -|=Support|[[michael.schirner@charite.de>>path:mailto:michael.schirner@charite.de]] 69 -|=Source Code|[[https:~~/~~/hub.docker.com/r/thevirtualbrain/fast_tvb>>url:https://hub.docker.com/r/thevirtualbrain/fast_tvb]] 70 -|=Download Page|[[https:~~/~~/hub.docker.com/r/thevirtualbrain/fast_tvb>>url:https://hub.docker.com/r/thevirtualbrain/fast_tvb]] 71 -|=License|GPL3 72 -|=Current Version|1.0 73 -|=All Versions|((( 74 -* 1.0 75 -))) 76 -))) 77 77 78 -== Publications using TVB C == 79 79 80 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/29308767>>url:https://www.ncbi.nlm.nih.gov/pubmed/29308767]] 81 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/32194282>>url:https://www.ncbi.nlm.nih.gov/pubmed/32194282]] 82 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/29911173>>url:https://www.ncbi.nlm.nih.gov/pubmed/29911173]] 83 -* [[https:~~/~~/www.thieme-connect.com/products/ejournals/html/10.1055/s-0039-3403020>>url:https://www.thieme-connect.com/products/ejournals/html/10.1055/s-0039-3403020]] 84 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/?term=31316116>>url:https://www.ncbi.nlm.nih.gov/pubmed/?term=31316116]] 85 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/?term=30035018>>url:https://www.ncbi.nlm.nih.gov/pubmed/?term=30035018]] 86 -* [[https:~~/~~/www.ncbi.nlm.nih.gov/pubmed/?term=27041212>>url:https://www.ncbi.nlm.nih.gov/pubmed/?term=27041212]] 87 -))) 88 - 89 - 90 90 (% class="col-xs-12 col-sm-4" %) 91 91 ((( 92 92 {{box title="**Contents**"}}
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