Changes for page TVB C -- High-speed parallel brain network models
Last modified by michaels on 2022/05/23 22:24
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... ... @@ -2,9 +2,11 @@ 2 2 ((( 3 3 (% class="container" %) 4 4 ((( 5 -= MyCollab'sExtendedTitle =5 += TVB C ~-~- High-speed parallel brain network models = 6 6 7 -My collab's subtitle 7 +A fast implementation of The Virtual Brain brain network simulator 8 + 9 +[[image:fasttvb.png]] 8 8 ))) 9 9 ))) 10 10 ... ... @@ -14,13 +14,20 @@ 14 14 ((( 15 15 = What can I find here? = 16 16 17 -* Notice how the table of contents on the right 18 -* is automatically updated 19 -* to hold this page's headers 19 +* an IPython notebook that describes how to 20 +** pull the TVB-C container into one of the associated supercomputers using PyUnicore 21 +** upload model data to the supercomputer 22 +** set up and run simulations 23 +** download simulation results 20 20 21 -= Whohasaccess? =25 +== How do I use it? == 22 22 23 -Describe the audience of this collab. 27 +* the simulation code is implemented as a Docker container 28 +* the container is executed on supercomputers and operated via IPython notebooks 29 +* Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb" 30 +* To use the notebook, download it onto your local filesystem, create a new Collab and upload it there. 31 +* Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook. 32 +* Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'" 24 24 ))) 25 25 26 26
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