Last modified by michaels on 2022/05/23 22:24
From version 7.1
edited by michaels
on 2020/05/04 16:06
Change comment: There is no comment for this version
To version 10.2
edited by michaels
on 2020/05/06 13:41
Change comment: Added tag [tool,CHARITE,brain network model,brain simulation,tvb,high performance,parallel,hpc,supercomputer,connectome,functional connectivity,the virtual brain]

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1 +tool|CHARITE|brain network model|brain simulation|tvb|high performance|parallel|hpc|supercomputer|connectome|functional connectivity|the virtual brain
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5 5  = TVB C ~-~- High-speed parallel brain network models =
6 6  
7 7  A fast implementation of The Virtual Brain brain network simulator
8 +
9 +[[image:fasttvb.png]]
8 8  )))
9 9  )))
10 10  
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19 19  ** upload model data to the supercomputer
20 20  ** set up and run simulations
21 21  ** download simulation results
24 +
25 +== How do I use it? ==
26 +
27 +* the simulation code is implemented as a Docker container
28 +* the container is executed on supercomputers and operated via IPython notebooks
29 +* Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb"
30 +* To use the notebook, download it onto your local filesystem, create a new Collab and upload it there.
31 +* Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook.
32 +* Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'"
22 22  )))
23 23  
24 24  
fasttvb.png
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1 +XWiki.michaels
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1 +36.4 KB
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