Last modified by dionperd on 2024/04/08 12:54
From version 5.1
edited by dionperd
on 2021/06/02 16:12
Change comment: Uploaded new attachment "HomeworkSolutionsOutputs.zip", version 1.1
To version 6.1
edited by dionperd
on 2021/06/02 16:15
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3 3  
4 4  == What can I find here? ==
5 5  
6 -* [[Homework materials>>url:https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]] including a use case of a TVB - Spiking Basal Ganglia multiscale cosimulation notebook (see also attached .zip file at Collab's front page)
7 -* [[Homework solutions>>url:https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/HomeworkSolutions.zip]] and [[Homework solutions' outputs>>url:https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/HomeworkSolutionsOutputs.zip]] (see also attached .zip files at Collab's front page; password protected)
6 +* [[Homework materials>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/MacGillSummerSchool/Homework]] including a use case of a TVB - Spiking Basal Ganglia multiscale cosimulation notebook (see also attached .zip file at Collab's front page)
7 +* [[Homework solutions>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/MacGillSummerSchool/HomeworkSolutions.zip]] and [[Homework solutions' outputs>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/MacGillSummerSchool/HomeworkSolutionsOutputs.zip]] (see also attached .zip files at Collab's front page; password protected)
8 8  
9 9  === Guide to run the use-case notebook ===
10 10  
11 11  1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>url:https://tvb-nest.apps.hbp.eu/]] and logging in with your EBRAINS account.
12 12  1. Navigate to "ContributedNotebooks" folder, which offers persistent storage for EBRAINS users.
13 -1. You will need the notebook [[BasalGangliaHomework.ipynb>>url:https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/Homework/BasalGangliaHomework.ipynb]], the data folder [[basal_ganglia_conn>>url:https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/basal_ganglia_conn]], and the pictures folder [[pics>>url:https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/pics]], found in the [[drive folder "Homework>>url:https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]]. All materials can also be found as a .zip file "Homework.zip" attached to Collab's front page (scroll down to find it).
13 +1. You will need the notebook [[BasalGangliaHomework.ipynb>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/MacGillSummerSchool/Homework/BasalGangliaHomework.ipynb]], the data folder [[basal_ganglia_conn>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/MacGillSummerSchool/Homework/basal_ganglia_conn]], and the pictures folder [[pics>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/MacGillSummerSchool/Homework/pics]], found in the [[drive folder "Homework/McGillSummerSchool>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/MacGillSummerSchool/Homework]]. All materials can also be found as a .zip file "Homework.zip" attached to Collab's front page (scroll down to find it).
14 14  1. The easiest way to get the above materials is to upload "Homework.zip" to "ContributedNotebooks" folder, and run the command
15 15  ! unzip ./Homework.zip
16 16  on a cell of a new notebook, from within the same folder.