Warning:  Due to planned infrastructure maintenance, the EBRAINS Wiki and EBRAINS Support system will be unavailable for up to three days starting Monday, 14 July. During this period, both services will be inaccessible, and any emails sent to the support address will not be received.

Attention: The EBRAINS Chat will down on Thursday, the 10th of July 2025 starting from 18.00pm CEST (my timezone) for up to 1 hour. 


Last modified by dionperd on 2024/04/08 12:55

From version 39.1
edited by dionperd
on 2021/06/02 16:06
Change comment: There is no comment for this version
To version 24.1
edited by dionperd
on 2021/05/27 19:12
Change comment: Uploaded new attachment "HomeworkSolutions.zip", version 1.1

Summary

Details

Page properties
Content
... ... @@ -2,7 +2,9 @@
2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= Courses on TVB-multiscale cosimulation =
5 += Course on TVB-multiscale cosimulation =
6 +
7 +McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
6 6  )))
7 7  )))
8 8  
... ... @@ -12,16 +12,19 @@
12 12  (((
13 13  = What can I find here? =
14 14  
15 -Materials for TVB-multiscale cosimulation courses for
17 +* Use case of a TVB - Spiking Basal Ganglia cosimulation
18 +* Homework materials
16 16  
17 -* 5th TVB in EBRAINS workshop (June 4th, 2021)
18 -* [[McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 7th, 2021)>>https://wiki.ebrains.eu/bin/view/Collabs/tvb-multiscale-cosim-mcgillsummerschool/5thTVBinEBRAINSworkshop20210604/]]
19 -
20 20  = Who has access? =
21 21  
22 22  Everybody with an EBRAINS account.
23 23  
24 -
24 +
25 += Guide to run the use-case notebook =
26 +
27 +1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
28 +1. Navigate to "ContributedNotebooks" folder and upload the notebook "BasalGangliaHomework.ipynb" and the data folder "basal_ganglia_conn". Both can be found either in the [[drive folder "Lecture">>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Lecture]], or in .zip file "Lecture.zip" attached to this page (scroll down to find it).
29 +1. Now you can run the notebook in the TVB-NEST app. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
25 25  )))
26 26  
27 27  
HomeworkSolutionsOutputs.zip
Author
... ... @@ -1,1 +1,0 @@
1 -XWiki.dionperd
Size
... ... @@ -1,1 +1,0 @@
1 -23.2 MB
Content